Job Description P08312 Confidence 99.23% Date Thu Jan 5 11:01:02 GMT 2012 Rank 40 Aligned Residues 197 % Identity 21% Template c2akwB_ PDB info PDB header:ligase Chain: B: PDB Molecule:phenylalanyl-trna synthetase beta chain; PDBTitle: crystal structure of t.thermophilus phenylalanyl-trna synthetase2 complexed with p-cl-phenylalanine Resolution 2.80 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																											.	.																												.	.	.	.
Query SS confidence																											.	.																												.	.	.	.
Query Sequence		E	S	A	A	L	N	A	R	L	A	A	E	T	I	D	V	S	L	P	G	R	R	I	E	N	.	.	G	G	L	H	P	V	T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	.	.	.	.	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R
Query Conservation																											.	.																												.	.	.	.
Alig confidence																											.	.																												.	.	.	.
Template Conservation
Template Sequence		L	V	E	E	V	A	R	I	Q	G	Y	E	T	I	P	L	A	L	P	A	F	F	P	A	P	D	N	R	G	V	E	A	P	Y	R	K	E	Q	R	L	R	E	V	L	S	G	L	G	F	Q	E	V	Y	T	Y	S	F	M	D	P	E	D	A	R	R	F	R	L	D	P	P	R	L	L	L	L	N	P	L	A
Template Known Secondary structure												G	G	G	S											G	G	G	T	T	T	T																	T								S				T	T					T	T					S		B		S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.						.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.											.
Predicted Secondary structure																												.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	.	.	.	.	.	K	A	Q	Q	P	P	I	R	I	I	A	P	G	R	V	Y	R	N	D	Y	D	Q	T	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	.	.	.	.	.	.	.	.	.	.	N
Query Conservation																												.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.																.	.	.	.	.																				.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Sequence		P	E	K	.	.	.	.	.	.	.	.	A	A	L	R	T	H	L	F	P	G	L	V	R	V	L	K	E	N	L	D	L	D	R	P	E	R	A	L	L	F	E	V	G	R	V	F	R	E	R	.	.	.	.	.	.	.	E	E	T	H	L	A	G	L	L	F	G	E	G	V	G	L	P	W	A	K	E	R	L
Template Known Secondary structure		G	G	G	.	.	.	.	.	.	.	.	S				S		S															S			S	B											S	S	S	.	.	.	.	.	.	.											B	S					T	T	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template SS confidence
		539	540	.									.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580								.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F	R	P	S	Y	F	P	F	T	E	P	S	A	E	V	D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	G	M	V	H	P	N	V	L	R	N	V	G	I	D	P	E	V	Y	S	G	F	A	F	G	M
Query Conservation
Alig confidence																						.	.	.																									.	.	.																				.			.	.	.
Template Conservation																						.	.	.																									.	.	.																				.			.	.	.
Template Sequence		S	G	Y	F	L	L	K	G	Y	L	E	A	L	F	A	R	L	G	L	A	.	.	.	F	R	V	E	A	Q	A	F	P	F	L	H	P	G	V	S	G	R	V	L	V	E	G	E	.	.	.	E	V	G	F	L	G	A	L	H	P	E	I	A	Q	E	L	E	L	P	.	P	V	.	.	.	H	L	F	E	L
Template Known Secondary structure			S															T	T			.	.	.									T	T												T	T		.	.	.																T	T			.			.	.	.
Template Predicted Secondary structure																						.	.	.																									.	.	.																				.			.	.	.
Template SS confidence
		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.				.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.				.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.		.	.				.	670	.	.	.
		298	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	P
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		674	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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