Job Description P08312 Confidence 99.76% Date Thu Jan 5 11:01:02 GMT 2012 Rank 20 Aligned Residues 187 % Identity 14% Template c1x55A_ PDB info PDB header:ligase Chain: A: PDB Molecule:asparaginyl-trna synthetase; PDBTitle: crystal structure of asparaginyl-trna synthetase from pyrococcus2 horikoshii complexed with asparaginyl-adenylate analogue Resolution 1.80 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	Q	Q	P	P	I	R	I	I	A
Query Conservation
Alig confidence																																										.	.																	.	.	.	.	.	.	.	.					.				.	.
Template Conservation																																										.	.																	.	.	.	.	.	.	.	.					.				.	.
Template Sequence		E	T	L	I	M	A	A	R	E	W	L	L	K	D	G	W	H	E	V	F	P	P	I	L	V	T	G	A	V	E	G	G	A	T	L	F	K	L	K	Y	.	.	F	D	K	Y	A	Y	L	S	Q	S	A	Q	L	Y	L	E	.	.	.	.	.	.	.	.	A	A	I	F	.	G	L	E	.	.	K	V	W	S
Template Known Secondary structure															T	T								S			S			S	S		G	G	G							.	.	T	T							S		S						.	.	.	.	.	.	.	.					.			S	.	.
Template Predicted Secondary structure																																										.	.																	.	.	.	.	.	.	.	.					.				.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.									.	.	.	.		.	200	.			.	.	.	.
		190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure										.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	R	V	Y	R	N	D	.	.	Y	D	Q	T	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	N	I	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																					.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		L	T	P	S	F	R	A	E	K	S	R	T	R	R	H	L	T	E	F	W	H	L	E	L	E	A	A	W	M	D	.	.	L	W	D	I	M	K	V	E	E	E	L	V	S	Y	M	V	Q	R	T	L	E	L	R	K	K	E	I	E	M	F	R	D	D	L	T	T	L	K	N	T	E	P	P	F	P	R	I	S
Template Known Secondary structure											S			T	T			S											T			.	.																													T	T		S							T			S	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
																																			235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.								.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.					.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.					.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	E	D	L	Q	I	R	F	R	P	S	Y	F	P	F	.	T	E	P	S	.	.	.	.	.	.	.	A	E	V	D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.					.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.					.	.	.	.	.	.	.								.
Template Conservation																																																																						.
Template Sequence		Y	D	E	A	I	D	I	L	Q	S	K	G	V	N	V	E	W	G	D	D	L	G	A	D	E	E	R	V	L	T	E	E	F	D	R	P	F	F	V	Y	G	Y	P	K	H	I	K	A	F	Y	M	K	E	D	P	N	D	P	R	K	V	L	A	S	D	M	L	A	.	P	E	G	Y	G	E	I	I	G	G	S
Template Known Secondary structure												T	T					T	T												G	G	G		S	S								B	G	G	G	S		T	T	B		B		S	S		T	T	B	B	S							.	T	T	T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.
		274																	.	.	.	.					.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Query Sequence		M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	P	N	.	.	.	.	V	L	R	N	V	G	I	D	P	E	V	Y	S	G	F	A	F	G	M	G	M	E	R	L	T	M	L	R	Y	G	V	T	D	L	R	S
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.															.	.
Template Conservation																																									.	.
Template Sequence		Q	R	E	D	D	Y	D	K	L	L	N	R	I	L	E	E	G	M	D	P	K	D	Y	E	W	Y	L	D	L	R	R	Y	G	S	V	P	H	S	G	.	.	F	G	L	G	V	E	R	L	V	A	W	V	L	K	L	D	H	I	R	W
Template Known Secondary structure			B														T	T			G	G	G	G						T	T	T	S	S							.	.													T	T		S		G	G	G
Template Predicted Secondary structure																																									.	.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.			.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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