Job Description P08312 Confidence 99.75% Date Thu Jan 5 11:01:02 GMT 2012 Rank 23 Aligned Residues 185 % Identity 21% Template c1wydB_ PDB info PDB header:ligase Chain: B: PDB Molecule:hypothetical aspartyl-trna synthetase; PDBTitle: crystal structure of aspartyl-trna synthetase from sulfolobus tokodaii Resolution 2.30 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	Q	Q	P	P	I	R	I	I	A
Query Conservation
Alig confidence																																															.	.										.		.	.	.	.	.	.	.	.									.	.
Template Conservation																																															.	.										.		.	.	.	.	.	.	.	.									.	.
Template Sequence		S	L	A	L	K	A	F	R	E	T	L	Y	K	E	G	F	I	E	I	F	T	P	K	I	I	A	S	A	T	E	G	G	A	Q	L	F	P	V	I	Y	F	G	K	E	A	.	.	F	L	A	Q	S	P	Q	L	Y	.	K	.	.	.	.	.	.	.	.	E	L	M	A	G	V	V	E	.	.	R	V	F	E
Template Known Secondary structure															T	T								S			S	S		S	S	T	T									T	T				.	.				S		S				.		.	.	.	.	.	.	.	.								S	.	.
Template Predicted Secondary structure																																															.	.										.		.	.	.	.	.	.	.	.									.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.		.									.	.	.	.	.	.	.	200			.	.	.	.
		190	.	.	.	.	.	.	.		.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure										.					.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.					.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	R	V	Y	R	N	D	.	Y	D	Q	T	.	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	N	I	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.					.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.					.																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		V	A	P	A	W	R	A	E	E	S	D	T	P	F	H	L	A	E	F	I	S	M	D	V	E	M	A	F	A	D	.	.	Y	N	D	V	M	Q	L	L	E	K	I	L	H	N	I	V	K	T	I	K	E	E	G	K	E	E	L	K	I	L	N	Y	E	P	P	E	V	K	I	P	I	K	R	L	K	Y	T	E
Template Known Secondary structure													S	S	S			S											S			.	.																							S								T								S	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
																																		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.								.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.							.	.	.	.	.	.	.																			.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.							.	.	.	.	.	.	.																			.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	D	L	Q	I	R	F	R	P	S	Y	F	P	F	.	T	E	P	S	A	E	.	.	.	.	.	.	.	V	D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	G	M	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.							.	.	.	.	.	.	.																			.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.							.	.	.	.	.	.	.						.				.	.								.
Template Conservation																																																																				.				.	.
Template Sequence		A	I	E	I	L	R	S	K	G	Y	N	I	K	F	G	D	D	I	G	T	P	E	L	R	I	L	N	E	E	L	K	E	D	L	Y	F	I	V	D	W	P	S	D	A	R	P	F	Y	T	K	S	K	S	E	N	P	E	L	S	E	S	F	D	L	I	Y	.	K	F	L	.	.	E	I	V	S	G	S	T	R
Template Known Secondary structure									T	T					T	T																S		S								B	G	G	G	S		T	T	B		B		S	S		T	T	B	B	S							.	T	T		.	.								B
Template Predicted Secondary structure																																																																				.				.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.			.	.	.	.	.	.	.	.
							275	.	.	.	.	280	.	.	.	.	.	.	.	.	.															290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	V	H	P	N	V	L	R	N	V	G	I	D	P	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	G	F	A	F	G	M	G	M	E	R	L	T	M	L	R	Y	G	V	T	D	L	R	S
Query Conservation		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.
Template Conservation																																							.	.
Template Sequence		N	H	K	R	E	V	L	E	E	A	L	K	K	K	G	L	K	P	E	S	F	E	F	F	L	K	W	F	D	Y	G	M	P	P	H	A	G	.	.	F	G	M	G	L	A	R	L	M	V	M	L	T	G	I	Q	S	V	K	E
Template Known Secondary structure				S										T	T	T			G	G	G	G					G	G	G	G	S								.	.																		T	T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.			.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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