Job Description P08312 Confidence 98.56% Date Thu Jan 5 11:01:02 GMT 2012 Rank 75 Aligned Residues 129 % Identity 16% Template c1wu7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:histidyl-trna synthetase; PDBTitle: crystal structure of histidyl-trna synthetase from2 thermoplasma acidophilum Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																									.	.	.	.																					.
Query SS confidence																																																									.	.	.	.																					.
Query Sequence		V	T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	.	.	.	.	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	Q	Q	P	.
Query Conservation																																																									.	.	.	.																					.
Alig confidence																														.	.	.	.	.											.												.	.	.	.																					.
Template Conservation																														.	.	.	.	.											.
Template Sequence		E	K	F	I	F	K	T	A	E	E	A	A	E	A	F	G	F	R	R	I	D	F	P	S	L	E	Y	L	.	.	.	.	.	D	L	Y	R	I	K	S	G	E	E	.	L	L	Q	Q	T	Y	S	F	V	D	K	G	G	R	E	V	T	L	I	P	E	A	T	P	S	T	V	R	X	V	T	S	R	K	D	L
Template Known Secondary structure																T	T								S				T	.	.	.	.	.					T	T	S		T	T	.	G	G	G	G	S						T	T	S							S		S									T	T		T	T
Template Predicted Secondary structure																														.	.	.	.	.											.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
				184	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.
Predicted Secondary structure		.	.															.																										.	.																	.
Query SS confidence		.	.															.																										.	.																	.
Query Sequence		.	.	P	I	R	I	I	A	P	G	R	V	Y	R	N	D	.	Y	D	Q	T	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	N	I	S	F	T	N	.	.	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	.	L	Q	I	R	F
Query Conservation		.	.															.																										.	.																	.
Alig confidence		.	.															.																										.	.																	.
Template Conservation
Template Sequence		Q	R	P	L	R	W	Y	S	F	P	K	V	W	R	Y	E	E	P	Q	A	G	R	Y	R	E	H	Y	Q	F	N	A	D	I	F	G	S	D	S	P	E	A	D	A	E	V	I	A	L	A	S	S	I	L	D	R	L	G	L	Q	D	I	Y	E	I	R	I
Template Known Secondary structure			S	S															S		S	S			S											S			S																		T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions