Job Description P08312 Confidence 99.20% Date Thu Jan 5 11:01:02 GMT 2012 Rank 42 Aligned Residues 233 % Identity 17% Template c1nyqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:threonyl-trna synthetase 1; PDBTitle: structure of staphylococcus aureus threonyl-trna synthetase2 complexed with an analogue of threonyl adenylate Resolution 3.20 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																	.	.	.					.																																						.	.	.	.
Query SS confidence																																	.	.	.					.																																						.	.	.	.
Query Sequence		K	E	Q	V	Q	Q	A	L	N	A	R	K	A	E	L	E	S	A	A	L	N	A	R	L	A	A	E	T	I	D	V	.	.	.	S	L	P	G	.	R	R	I	E	N	G	G	L	H	P	V	T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	.	.	.	.
Query Conservation																																	.	.	.					.																																						.	.	.	.
Alig confidence																																	.	.	.					.																																						.	.	.	.
Template Conservation
Template Sequence		K	K	E	L	K	A	H	L	Q	M	L	E	E	R	K	E	R	D	H	R	K	I	G	K	E	L	E	L	F	T	N	S	Q	L	V	G	A	G	L	P	L	W	L	P	N	G	A	T	I	R	R	E	I	E	R	Y	I	V	D	K	E	V	S	M	G	Y	D	H	V	Y	T	P	V	L	A	N	V	D	L	Y
Template Known Secondary structure																											T	T						T	T	T		T	T																										T	T								S				T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
								136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.
Predicted Secondary structure		.	.	.	.	.	.																																																	.	.	.	.	.															.					.	.
Query SS confidence		.	.	.	.	.	.																																																	.	.	.	.	.															.					.	.
Query Sequence		.	.	.	.	.	.	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	Q	Q	P	.	.	.	.	.	P	I	R	I	I	A	P	G	R	V	Y	R	N	D	.	Y	D	Q	T	.	.
Query Conservation		.	.	.	.	.	.																																																	.	.	.	.	.															.					.	.
Alig confidence		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.															.					.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	S	G	H	W	D	H	Y	Q	E	D	M	F	P	P	M	Q	L	D	E	T	E	.	.	.	.	.	.	.	.	.	.	S	M	V	L	R	P	M	N	C	P	H	H	M	M	I	Y	A	N	K	P	H	S	Y	R	E	L	P	I	R	I	A	E	L	G	T	M	H	R	Y	E	A	S	G	A	V	S	G
Template Known Secondary structure					T	S	T	T	T	T	T	T	T	S				B		S	T	T	S		.	.	.	.	.	.	.	.	.	.						S		S										T	S			B	T	T	T		S															T	T	T		B	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.											.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
				202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.	.																						.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																						.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	N	I	S	F	T	N	.	.	.	.	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F	R	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.																						.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																						.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	R	V	R	G	M	T	L	N	D	S	H	I	F	V	R	P	D	Q	I	K	E	E	F	K	R	V	V	N	M	I	I	D	V	Y	K	D	F	G	F	E	D	Y	S	F	R	L	S	Y	R	D	P	E	D	K	E	K	Y	F	D	D	D	D	M	W	N	K	A	E	N	M	L	K	E	A	A	D	E	L
Template Known Secondary structure		T	T	B		S													G	G	G																			T	T					B								S				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
											247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.							.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																											.	.																.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																											.	.																.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	Y	F	P	F	T	E	P	S	A	E	V	D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	.	.	G	M	V	H	P	N	V	L	R	N	V	G	I	D	P	.	.	.	.	.	.	E	V	Y	S	G	F	A	F	G	M	G	M	E	R	L	T	M	L	R
Query Conservation		.	.	.	.	.	.	.	.	.																											.	.																.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																											.	.																.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	S	Y	E	E	A	I	G	E	A	A	F	Y	G	P	K	L	D	V	Q	V	K	T	A	M	G	K	E	E	T	L	S	T	A	Q	L	D	F	L	L	P	E	R	F	D	L	T	Y	I	G	Q	D	G	E	H	H	R	P	V	V	I	H	R	G	V	V	S	T	M	E	R	F	V	A	F	L
Template Known Secondary structure		T								T		S	B	T	T	B										T	T	S												S	S					T	T						S	S	S
Template Predicted Secondary structure
Template SS confidence
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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