Job Description P08312 Confidence 98.79% Date Thu Jan 5 11:01:02 GMT 2012 Rank 62 Aligned Residues 193 % Identity 13% Template c1nj2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:proline-trna synthetase; PDBTitle: crystal structure of prolyl-trna synthetase from methanothermobacter2 thermautotrophicus Resolution 3.11 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	.	.	.	.	.	Q	Q	P	P
Query Conservation																																																																									.	.	.	.	.
Alig confidence													.																																	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation													.																																	.	.	.	.	.	.	.
Template Sequence		K	N	T	L	K	I	L	R	R	I	L	.	D	R	D	H	E	E	V	L	F	P	L	L	V	P	E	D	E	L	A	E	V	Y	W	V	T	H	G	G	L	S	K	L	.	.	.	.	.	.	.	Q	R	K	L	A	L	R	P	T	S	E	T	V	M	Y	P	M	F	A	L	W	V	R	S	H	T	D	L	P
Template Known Secondary structure													.	T	T	T								S																S	S	S	S			.	.	.	.	.	.	.								S		T														S	T	T	T
Template Predicted Secondary structure													.																																	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.								.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.				.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.						.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.
Predicted Secondary structure															.					.	.	.									.										.	.	.	.	.																												.
Query SS confidence															.					.	.	.									.										.	.	.	.	.																												.
Query Sequence		I	R	I	I	A	P	G	R	V	Y	R	N	D	.	Y	D	Q	T	.	.	.	H	T	P	M	F	H	Q	M	.	E	G	L	I	V	D	T	N	I	.	.	.	.	.	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F	R	P	.	S	Y	F	P	F	T	E	P
Query Conservation															.					.	.	.									.										.	.	.	.	.																												.
Alig confidence															.					.	.	.									.										.	.	.	.	.																												.
Template Conservation
Template Sequence		M	R	F	Y	Q	V	V	N	T	F	R	Y	E	T	K	H	T	R	P	L	I	R	V	R	E	I	T	T	F	K	E	A	H	T	I	H	A	T	A	S	E	A	E	E	Q	V	E	R	A	V	E	I	Y	K	E	F	F	N	S	L	G	I	P	Y	L	I	T	R	R	P	P	W	D	K	F	P	G	S	E	Y
Template Known Secondary structure																S			B	T	T	T	B		S													S	S																							T							B			T	T	T	S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.								.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																									.	.	.	.	.	.	.											.	.
Query SS confidence																																									.	.	.	.	.	.	.											.	.
Query Sequence		S	A	E	V	D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	G	M	V	H	P	N	V	L	R	N	V	G	I	D	P	E	V	Y	S	G	.	.	.	.	.	.	.	F	A	F	G	M	G	M	E	R	L	.	.	T	M	L	R	Y	G	V	T	D
Query Conservation																																									.	.	.	.	.	.	.											.	.
Alig confidence																																									.	.	.	.	.	.	.							.				.	.
Template Conservation																																																						.
Template Sequence		T	V	A	F	D	T	L	M	P	D	G	K	T	L	Q	I	G	T	V	H	N	L	G	Q	T	F	A	R	T	F	E	I	K	F	E	T	P	E	G	D	H	E	Y	V	H	Q	T	C	Y	G	L	S	.	D	R	V	I	A	S	V	I	A	I	H	G	D	E
Template Known Secondary structure										T	T	S													S							T						T	T	S														.	T										T			S
Template Predicted Secondary structure																																																						.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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