Job Description P08312 Confidence 99.16% Date Thu Jan 5 11:01:02 GMT 2012 Rank 43 Aligned Residues 148 % Identity 32% Template c1n9wA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:aspartyl-trna synthetase 2; PDBTitle: crystal structure of the non-discriminating and archaeal-2 type aspartyl-trna synthetase from thermus thermophilus Resolution 2.30 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	Q	Q	P	P	I	R	I	I	A
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.									.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.									.	.
Template Sequence		A	A	L	V	R	G	F	R	R	Y	L	D	R	Q	D	F	T	E	I	F	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	L	Y	K	.	.	.	.	.	.	.	.	Q	I	M	V	G	V	F	E	.	.	R	V	Y	E
Template Known Secondary structure															T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.								S	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.									.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150																																.	.	.	.	.									.	.	.	.	160	.	.	.			.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	R	V	Y	R	N	D	Y	D	Q	T	H	T	P	M	F	H	Q	M	E	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	P	V	.	.	.	.	.	.	.	.	.	.	.	E	Y	L	S	L	D	V	E	M	G	F	I	A	D	E	E	D	L	M	R	L	E	E	A	L	L	A	E	M	L	E	E	A	L	N	T	A	G	D	E	I	R	L	L	G	A	T	W	P	S	F	P	Q	D	I	P	R	L	T	H	A	E	A	K	R
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.											S		S	S																							S							T	T							S	S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.												200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
										213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.							.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																		.									.	.	.	.	.	.																						.	.
Query SS confidence		.	.	.	.	.	.	.	.																																		.									.	.	.	.	.	.																						.	.
Query Sequence		.	.	.	.	.	.	.	.	I	V	D	T	N	I	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F	R	P	.	S	Y	F	P	F	T	E	P	.	.	.	.	.	.	S	A	E	V	D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	G	M	.	.	V
Query Conservation		.	.	.	.	.	.	.	.																																		.									.	.	.	.	.	.																						.	.
Alig confidence		.	.	.	.	.	.	.	.																																		.									.	.	.	.	.	.									.	.				.								.	.
Template Conservation																																																																		.	.				.
Template Sequence		I	L	K	E	E	L	G	Y	P	V	G	Q	D	L	S	E	E	A	E	R	L	L	G	E	Y	A	K	E	R	W	G	S	D	W	L	F	V	T	R	Y	P	R	S	V	R	P	F	Y	T	Y	P	E	E	D	G	T	T	R	S	F	D	L	L	F	.	.	R	G	L	.	E	I	T	S	G	G	Q	R	I	H
Template Known Secondary structure						T	S						S	S																	T			S								B	G	G	G	S		T	T	B		B		T	T	S	B	B	S							.	.	T	T		.								B
Template Predicted Secondary structure																																																																		.	.				.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.			.	.	.		.	.	.	.	.	350	.	.	.	.
		276	.	.	.	280	.	.	.					.	.	.	.	.	.															290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure										.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	P	N	V	L	R	N	V	.	.	.	.	G	I	D	P	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	G	F	A	F	G	M	G	M	E	R	L	T	M	L	R	Y	G	V	T	D	L	R	S
Query Conservation										.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.
Template Conservation																																					.	.
Template Sequence		R	Y	E	E	L	L	E	S	L	K	A	K	G	M	D	P	E	A	F	H	G	Y	L	E	V	F	K	Y	G	M	P	P	H	G	G	.	.	F	A	I	G	A	E	R	L	T	Q	K	L	L	G	L	P	N	V	R	Y
Template Known Secondary structure													T	T			G	G	G	G					G	G	G	G	S				S				.	.													T	T		S	S	G	G	G
Template Predicted Secondary structure																																					.	.
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.			390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions