Job Description P08312 Confidence 97.95% Date Thu Jan 5 11:01:02 GMT 2012 Rank 87 Aligned Residues 105 % Identity 7% Template c1g5hA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:mitochondrial dna polymerase accessory subunit; PDBTitle: crystal structure of the accessory subunit of murine mitochondrial2 polymerase gamma Resolution 1.95 Å

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		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																																											.	.	.	.
Query SS confidence																		.	.	.	.	.	.																																											.	.	.	.
Query Sequence		L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	.	.	.	.	.	.	Q	Q	P	P	I	R	I	I	A	P	G	R	V	Y	R	N	D	Y	D	Q	T	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	N	I	S	F	T	N	.	.	.	.	L	K	G	T	L	H	D	F	L	R	N	F
Query Conservation																		.	.	.	.	.	.																																											.	.	.	.
Alig confidence																		.	.	.	.	.	.																			.	.																							.	.	.	.
Template Conservation																																										.	.
Template Sequence		K	L	R	A	T	L	L	H	G	A	L	E	H	Y	V	N	C	L	D	L	V	N	R	K	L	P	F	G	L	A	Q	I	G	V	C	F	H	P	V	S	.	.	T	R	V	G	E	K	T	E	A	S	L	V	W	F	T	P	T	R	T	S	S	Q	W	L	D	F	W	L	R	H	R	L	L	W	W	R	K	F
Template Known Secondary structure					S		S							T								T	T	T	B	S																.	.																																					T	T
Template Predicted Secondary structure																																										.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	E	D	L	Q	I	R	F	R	P	S	Y	F	P	F	T	E	P	S	A	E	V	D	V	M	G	K	N	G	K	W	L	E	V	L	G	C
Query Conservation
Alig confidence																													.
Template Conservation																													.
Template Sequence		A	X	S	P	S	N	F	S	S	A	D	C	Q	D	E	L	G	R	K	G	S	K	L	Y	Y	S	F	.	P	W	G	K	E	P	I	E	T	L
Template Known Secondary structure			S	S	G	G	G									T	T	S											.	T	T
Template Predicted Secondary structure																													.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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