Job Description P0AFV0 Confidence 99.93% Date Thu Jan 5 11:27:20 GMT 2012 Rank 3 Aligned Residues 238 % Identity 17% Template c3lnnB_ PDB info PDB header:metal transport Chain: B: PDB Molecule:membrane fusion protein (mfp) heavy metal cation efflux PDBTitle: crystal structure of zneb from cupriavidus metallidurans Resolution 2.80 Å

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		52	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		P	Y	T	F	T	A	Q	K	A	V	.	.	.	I	A	I	P	I	T	P	Q	V	T	G	I	V	T	E	V	T	D	K	N	N	Q	L	I	Q	K	G	E	V	L	F	K	L	D	P	V	R	Y	Q	A	R	V	D	R	L	Q	A	D	L	M	T	A	T	H	N	I	K	T	L	R	A	Q	L	T	E	A	Q
Query Conservation												.	.	.
Alig confidence												.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	F	N	L	P	A	M	I	E	A	D	P	A	K	L	V	K	V	L	P	P	L	A	G	R	I	V	S	L	N	K	Q	L	G	D	E	V	K	A	G	D	V	L	F	T	I	D	S	A	D	L	A	Q	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S	S	S							S	S											T	T					S	S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	T	T	Q	V	S	A	E	R	D	R	L	F	K	N	Y	Q	R	Y	L	K	G	S	Q	A	A	V	N	P	F	S	E	R	D	I	D	D	A	R	Q	N	F	L	A	Q	D	A	L	V	K	G	S	V	A	E	Q	A	Q	I	Q	S	Q	L	D	S	M	V	N	G	E	Q	S	Q	I	V	S	L	R	A
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	A	A	K	A	R	A	A	M	T	M	A	R	R	N	L	D	R	Q	R	E	L	D	K	S	E	I	A	A	K	R	D	F	E	Q	A	Q	S	D	Y	D	Q	A	A	S	E	S	Q	R	A	D	A	R	L	A	Q	L	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G
Template Known Secondary structure																						T	T	S	S		S	S		S	S																														T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																			.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	T	E	A	K	Y	N	L	E	Q	T	V	I	R	A	P	S	N	G	Y	V	T	Q	V	L	I	R	P	G	T	Y	A	A	A	L	P	L	R	P	V	M	V	F	I	P	E	Q	K	R	Q	I	V	A	Q	F	R	Q	N	S	L	L	R	L	K	P	G	D	D	A	E	V	V	F	N	A	L	P	G	Q
Query Conservation
Alig confidence																																								.
Template Conservation																																								.
Template Sequence		G	G	T	L	Q	A	G	G	G	H	I	L	A	V	R	S	P	I	N	G	R	V	V	D	L	N	A	A	T	G	A	Y	W	N	D	T	T	A	.	S	L	M	T	V	A	D	L	S	H	V	F	V	T	A	N	A	Q	E	K	D	L	G	H	V	Y	V	G	Q	S	A	T	V	K	F	D	A	Y	D	D	P
Template Known Secondary structure				B			S	S			S							S	S											T	T						T	T		.									S										G	G	G	G	G	G			T	T								S	S	S		S
Template Predicted Secondary structure																																								.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	H	G	K	L	T	S	I	L	P	V	V	P	G	G	S	Y	Q	A	Q	G	V	L	Q	S	L	T	V	V	P	G	T	D	G	V	L	G	T	I	E	L	D	P	N	D	D	I	D	A	L	P	D	G	I	Y	A	Q	V	A	V	Y	S	D
Query Conservation
Alig confidence		.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	Q	P	G	K	V	R	Y	V	G	Q	I	L	D	A	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	T	K	V	R	M	V	F	D	N	P	D	G	R	L	R	P	G	M	F	A	Q	A	T	F	L	S	Q
Template Known Secondary structure		.										S	S			T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	S					T	T
Template Predicted Secondary structure		.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.																			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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