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Job DescriptionP0AFV0
Confidence33.60%DateThu Jan 5 11:27:20 GMT 2012
Rank122Aligned Residues112
% Identity15%Templatec3ipkA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:agi/ii; PDBTitle: crystal structure of a3vp1 of agi/ii of streptococcus mutans
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120.........130.........140.........150.........160.........170....
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Query Sequence  DPVRYQARVDRLQADLMTATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQ
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Template Sequence  NEADYQAKLTAYQTELARVQKANADAKAAYEAAVAANNAANAALTAENTAIKKRNA. . . . . . . . DAKADYEAKLAKYQAD
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   388.390.........400.........410.........420.........430.........440... ......450.........
 
   175....180.........190.........200.........210....
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Query Sequence  DALVKGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAK
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Template Conservation                                          
Template Sequence  LAKYQKDLADYPVKLKAYEDEQTSIKAALAELEKHKNEDG
Template Known Secondary structure  GGGTTSTT
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   460.........470.........480.........490.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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