 |
Job Description | P0AFV0 | Confidence | 75.66% | Date | Thu Jan 5 11:27:20 GMT 2012 |
Rank | 65 | Aligned Residues | 28 |
% Identity | 18% | Template | c3d4rE_ |
PDB info |
PDB header:unknown function | Chain: E: PDB Molecule:domain of unknown function from the pfam-b_34464 family; |
PDBTitle: crystal structure of a duf2118 family protein (mmp0046) from2 methanococcus maripaludis at 2.20 a resolution
|
Resolution | 2.20 Å |
|
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | T | G | I | V | T | E | V | T | D | K | N | N | Q | L | I | Q | K | G | E | V | L | F | K | L | D | P |
Query Conservation |   |
  |   |   |
|   |
|   |   |
|   |
|   |   |
|
|   |
|
|
|
|
|   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |
|   |   |
|   |   |   |
|   |
|
|   |   |
|
|   |
|
|   |
|   |
|
Template Sequence |   |
P | A | E | G | Y | K | V | Y | P | I | X | D | F | G | F | R | V | L | K | G | Y | R | L | A | T | L | E | S |
Template Known Secondary structure |   |
 |  |
| S | S |  |  |  |  |
| S |
|
| S |  |  |  |
| T | T |
|  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|