Job Description P0AFV0 Confidence 60.32% Date Thu Jan 5 11:27:20 GMT 2012 Rank 88 Aligned Residues 43 % Identity 21% Template c1q90A_ PDB info PDB header:photosynthesis Chain: A: PDB Molecule:apocytochrome f; PDBTitle: structure of the cytochrome b6f (plastohydroquinone : plastocyanin2 oxidoreductase) from chlamydomonas reinhardtii Resolution 3.10 Å

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		49	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure														.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query Sequence		Y	N	H	P	Y	T	F	T	A	Q	K	A	.	.	.	.	.	.	.	.	V	I	A	I	P	I	T	P	Q	V	T	G	I	V	T	E	V	.	.	.	.	.	.	.	T	D	K	N	N	Q	L	I	Q	K	G	E	V	L
Query Conservation														.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	N	A	S	A	A	G	K	I	V	A	I	T	A	L	S	E	K	K	G	G	F	E	V	S	I	E	K	A	N	G	E	V	V	V	D	K	I	P	A	G	P	D	L	I	V	K	E	G	Q	T	V	Q	A	D	Q	P	L
Template Known Secondary structure			B		S	S	S											T	T	T										S	S	S									S	S	S		B				T	T					T	T		B	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions