Job Description P0AFV0 Confidence 24.90% Date Thu Jan 5 11:27:20 GMT 2012 Rank 137 Aligned Residues 137 % Identity 10% Template c1mj1A_ PDB info PDB header:ribosome Chain: A: PDB Molecule:elongation factor tu; PDBTitle: fitting the ternary complex of ef-tu/trna/gtp and ribosomal proteins2 into a 13 a cryo-em map of the coli 70s ribosome Resolution 13.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.
Predicted Secondary structure																																																																			.					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.					.	.	.	.	.	.	.	.	.	.
Query Sequence		S	N	G	Y	V	T	Q	V	L	I	R	P	G	T	Y	A	A	A	L	P	L	R	P	V	M	V	F	I	P	E	Q	K	R	Q	I	V	A	Q	F	R	Q	N	S	L	L	R	L	K	P	G	D	D	A	E	V	V	F	N	A	L	P	G	Q	V	F	.	H	G	K	L	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.					.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.																												.					.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.
Template Sequence		A	T	G	R	I	E	R	G	K	V	K	V	G	D	E	V	E	I	V	G	L	A	R	E	T	R	K	T	V	V	T	G	V	E	.	.	.	.	M	H	R	K	T	L	Q	E	G	I	A	G	D	N	V	G	L	L	L	R	G	V	S	R	E	E	V	E	R	G	Q	V	L	A	K	R	G	S	I	T	R	H
Template Known Secondary structure									S				T	T							S	S	S	S	S											.	.	.	.	S	S	S	S	B		S				T	T								S	S			G	G	G			T	T					S	T	T	S
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.					.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
						295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	T	S	I	L	P	V	V	P	G	G	S	Y	Q	A	Q	G	V	L	Q	S	L	T	V	V	P	G	T	D	G	V	L	G	T	I	E	L	D	P	N	D	D	I	D	A	L	P	D	G	I	Y	A	Q	V	A	V	Y	S	D	H	F	S	H	V	S	V	M	R	K	V	L	L	R
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		T	K	F	E	A	S	V	Y	I	L	K	K	E	E	G	G	R	H	T	G	F	F	T	G	Y	R	R	Q	F	Y	F	R	T	T	D	V	T	G	V	V	R	L	R	Q	G	V	E	M	V	M	R	G	D	N	V	T	F	T	V	E	L	I	K	R	V	A	L	E	E	G	L	R	F	A	I	R
Template Known Secondary structure													G	G	G	T			S	S		B		T	T								T	T											T	T				B		T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions