Job Description P0AG78 Confidence 86.42% Date Wed Jan 25 15:20:33 GMT 2012 Rank 111 Aligned Residues 203 % Identity 11% Template d2a5sa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.										.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.
Query Sequence		Q	Y	N	K	A	F	S	A	H	W	K	Q	Q	T	G	D	N	V	V	I	R	Q	S	H	G	G	S	.	.	.	.	.	.	.	.	.	G	K	Q	A	T	S	V	I	N	G	I	E	A	D	V	V	T	L	A	L	A	Y	D	V	D	A	I	A	E	R	G	R	I	D	K	E	W	I	K	R	L	P	D	N
Query Conservation																													.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																.	.	.	.	.	.	.	.	.												.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.																																				.																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	L	K	K	L	S	R	.	.	.	.	T	V	K	F	T	Y	D	L	Y	L	V	T	N	G	K	H	G	K	K	V	N	N	V	W	N	G	M	I	G	E	V	V	Y	Q	R	.	A	V	M	A	V	G	S	L	T	I	N	E	E	R	S	E	V	.	.	.	.	.	.	.	.	.	.	.	V	D	F	S
Template Known Secondary structure										.	.	.	.			T										S	S	S	S					T	T											T	T	S	.		S				S	S		B							T	T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.																																				.																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.												.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	P	Y	T	S	T	I	V	F	L	V	R	K	G	N	P	K	Q	I	H	D	W	N	D	L	I	K	P	G	V	S	V	I	T	P	N	P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L	H	H	N	N	N	D	Q	A	K	A	Q	D	F	V	R	A	L	Y	K	N	V	E	V	L
Query Conservation
Alig confidence																		.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	F	V	E	T	G	I	S	V	M	V	S	R	Q	V	.	T	G	L	S	D	K	K	F	Q	R	P	H	D	Y	S	P	P	F	R	F	G	T	V	P	N	G	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	N	I	R	N	N	Y	P	Y	M	H	Q	Y	M	T	R	F
Template Known Secondary structure																		.		S	T	T	S					S	G	G	G	S	S	S								T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T									G	G	G
Template Predicted Secondary structure																		.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.																		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	G	A	R	G	S	T	N	T	F	V	E	R	G	I	G	D	V	L	I	A	W	E	N	E	A	L	L	A	A	N	E	L	G	K	D	K	F	E	I	V	T	P	S	E	S	I	L	A	E	P	T	V	S	V	V	D	K	V	V	E	K	K	G	T	K	E	V	A	E	A	Y	L	K	Y	L	Y	S	P
Query Conservation
Alig confidence																																																			.	.	.
Template Conservation																																																			.	.	.
Template Sequence		N	Q	R	G	V	E	D	A	L	V	S	L	K	T	G	K	L	D	A	F	I	Y	D	A	A	V	L	N	Y	K	A	G	R	D	E	G	C	K	L	V	T	I	G	S	G	Y	I	F	A	.	.	.	T	T	G	Y	G	I	A	L	Q	K	G	S	P	W	K	R	Q	I	D	L	A	L	L	Q	F	V	G	D
Template Known Secondary structure				S	S										T	T	S		S															T		T	T	S										G	G	G	.	.	.										T	T		T	T
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
			269	270	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	E	G	Q	E	I	A	A	K	N
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	E	M	E	E	L	E	T	L	W
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions