Job Description P0AG78 Confidence 98.06% Date Wed Jan 25 15:20:33 GMT 2012 Rank 89 Aligned Residues 232 % Identity 12% Template d1xs5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.85

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	I	Q	L	L	N	V	S	Y	D	P	T	R	E	L	Y	E	Q	Y	N	K	A	F	S	A	H	W	K	Q	Q	T	G	D	N	V	V	I	R	Q	S	H	G	G	S	G	K	Q	A	T	S	V	I	N	G	I	E	A	D	V	V	T	L	A	L	A	Y	D	V	D	A	I	A	E	R	G	R	I	D	K
Query Conservation
Alig confidence																												.	.	.	.										.																	.																							.
Template Conservation																												.	.	.	.										.																	.																							.
Template Sequence		K	D	E	T	V	G	V	G	V	L	S	E	P	H	A	R	L	L	E	I	A	K	E	E	V	K	.	.	.	.	K	Q	H	I	E	L	R	I	V	.	E	F	T	N	Y	V	A	L	N	E	A	V	M	R	G	D	.	I	L	M	N	F	F	Q	H	V	P	H	M	Q	Q	F	N	Q	E	H	N	G	D	.
Template Known Secondary structure												S	T	T														.	.	.	.	T	T	T							.			S												T	S	.	S	S																		T			.
Template Predicted Secondary structure																												.	.	.	.										.																	.																							.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	I	K	R	L	P	D	N	S	A	P	Y	T	S	T	I	V	F	L	V	R	K	G	N	P	K	Q	I	H	D	W	N	D	L	I	K	P	G	V	S	V	I	T	P	N	P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L	H	H	N	N	N	D	Q	A	K	A	Q	D	F	V	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	L	V	S	V	G	N	V	H	V	E	P	L	A	L	Y	S	R	T	Y	R	H	V	S	D	F	P	A	.	.	.	.	G	A	V	I	A	I	P	N	D	S	S	N	E	A	R	A	L	R	L	L	E	A	A	G	F	I	R	M	R	A	G	S	G	L	F	A	T	V	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.																	S	S			S	G	G	G			T	.	.	.	.	T								S														T	T	S					T	T			T	T			G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template SS confidence
												78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	Y	K	N	V	E	V	L	D	S	G	A	R	G	S	T	N	T	F	V	E	R	G	I	G	D	V	L	I	A	W	E	N	E	A	L	L	A	A	N	E	L	G	K	D	K	F	E	I	V	T	P	S	E	S	I	L	A	E	P	T	V	S	V	V	D	K	V	V	E	K	K	G	T	K	E	V	A	E
Query Conservation
Alig confidence																																																				.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		D	V	Q	Q	N	V	R	N	V	V	L	Q	E	V	E	S	A	L	L	P	R	V	F	D	Q	V	D	G	A	V	I	N	G	N	Y	A	I	M	A	G	L	S	A	R	R	D	G	L	A	V	.	.	.	.	.	.	E	P	D	A	S	A	Y	A	N	V	L	V	V	K	R	G	N	E	A	D	A	R	V	Q
Template Known Secondary structure		G					T	T									G	G	G					G	G	G	S	S												T	T			T	T	T	T		S			.	.	.	.	.	.		S		G	G	G	G								T	T		T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	L	K	Y	L	Y	S	P	E	G	Q	E	I	A	A	K	N	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	L	R	A	L	C	G	G	R	V	R	T	Y	L	K	E	R	Y
Template Known Secondary structure								T	S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions