Job Description P0AG78 Confidence 98.16% Date Wed Jan 25 15:20:33 GMT 2012 Rank 86 Aligned Residues 250 % Identity 14% Template d1p99a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	L	N	V	S	Y	D	P	T	R	E	L	Y	E	Q	Y	N	K	A	F	S	A	H	W	K	Q	Q	T	G	D	N	V	V	I	R	Q	S	H	G	G	S	G	K	Q	A	T	S	V	I	N	G	I	E	A	D	V	V	T	L	A	L	A	Y	D	V	D	A	I	A	E	R	G	R	I	D	K	E	W	I
Query Conservation
Alig confidence																										.	.	.	.	.								.																	.																								.	.	.
Template Conservation																										.	.	.	.	.								.																	.																								.	.	.
Template Sequence		K	V	T	I	G	V	A	S	N	D	T	K	A	W	E	K	V	K	E	L	A	K	K	D	.	.	.	.	.	D	I	D	V	E	I	K	.	H	F	S	D	Y	N	L	P	N	K	A	L	N	D	G	D	.	I	D	M	N	A	F	Q	H	F	A	F	L	D	Q	Y	K	K	A	H	K	G	T	K	.	.	.
Template Known Secondary structure								S	S	S													G	G	G	.	.	.	.	.	T							.			S	S	T	T	S							T	T	S	.	S	S																		T	T			.	.	.
Template Predicted Secondary structure																										.	.	.	.	.								.																	.																								.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	L	P	D	N	S	A	P	Y	T	S	T	I	V	F	L	V	R	K	G	N	P	K	Q	I	H	D	W	N	D	L	I	K	P	G	V	S	V	I	T	P	N	P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L	H	H	N	N	N	D	Q	A	K	A	Q	D	F	V	R	A	L	Y
Query Conservation
Alig confidence		.	.																				.	.	.	.	.	.	.	.																	.
Template Conservation		.	.																				.	.	.	.	.	.	.	.																	.
Template Sequence		.	.	I	S	A	L	S	T	T	V	L	A	P	L	G	I	Y	S	D	K	I	.	.	.	.	.	.	.	.	K	D	V	K	K	V	K	D	G	A	K	V	V	I	P	N	.	D	V	S	N	Q	A	R	A	L	K	L	L	E	A	A	G	L	I	K	L	K	K	D	F	G	L	A	G	T	V	K	D	I	T
Template Known Secondary structure		.	.																	S	S		.	.	.	.	.	.	.	.	S		G	G	G			T	T								.	S														T	T	S					T	T			T	T			G	G	G
Template Predicted Secondary structure		.	.																				.	.	.	.	.	.	.	.																	.
Template SS confidence
				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.									.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	V	E	V	L	D	S	G	A	R	G	S	T	N	T	F	V	E	R	G	I	G	D	V	L	I	A	W	E	N	E	A	L	L	A	A	N	E	L	G	K	D	K	F	E	I	V	T	P	S	E	S	I	L	A	E	P	T	V	S	V	V	D	K	V	V	E	K	K	G	T	K	E	V	A	E	A	Y	L
Query Conservation
Alig confidence																																																	.	.
Template Conservation																																																	.	.
Template Sequence		S	N	P	K	H	L	K	I	T	A	V	D	A	Q	Q	T	A	R	A	L	S	D	V	D	I	A	V	I	N	N	G	V	A	T	K	A	G	K	D	P	K	N	D	P	I	F	L	.	.	E	K	S	N	S	D	A	V	K	P	Y	I	N	I	V	A	V	N	D	K	D	L	D	N	K	T	Y	A	K	I	V
Template Known Secondary structure				T	T									G	G	G	T	T	G	G	G	G	T	S	S												T	T			T	T	T	S		S			.	.				S	S	G	G	G	G	G	G								G	G	G	T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.				.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																	.	.	.							.	.
Query SS confidence																	.	.	.							.	.
Query Sequence		K	Y	L	Y	S	P	E	G	Q	E	I	A	A	K	N	.	.	.	Y	Y	R	P	R	D	.	.	A	E	V	A	K	K	Y	E	N	A	F	P
Query Conservation																	.	.	.							.	.
Alig confidence																	.	.	.							.	.
Template Conservation
Template Sequence		E	L	Y	H	S	K	E	A	Q	K	A	L	Q	E	D	V	K	D	G	E	K	P	V	N	L	S	K	D	E	I	K	A	I	E	T	S	L	A
Template Known Secondary structure						S												T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions