Job Description P0AG78 Confidence 99.96% Date Wed Jan 25 15:20:33 GMT 2012 Rank 4 Aligned Residues 230 % Identity 15% Template d1atga_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.20

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	L	N	V	S	Y	D	P	T	R	E	L	Y	E	Q	Y	N	K	A	F	S	A	H	W	K	Q	Q	T	G	D	N	V	V	I	R	Q	S	H	G	G	S	G	K	Q	A	T	S	V	I	N	G	I	E	A	D	V	V	T	L	A	L	A	Y	D	V	D	A	I	A	E	R	G	R	I	D	K	E	W	I
Query Conservation
Alig confidence																											.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		E	L	K	V	V	T	A	T	N	F	L	G	T	L	E	Q	L	A	G	Q	F	A	K	Q	T	.	.	.	.	.	.	G	H	A	V	V	I	S	S	G	S	S	G	P	V	Y	A	Q	I	V	N	G	A	P	Y	N	V	F	F	S	A	D	E	K	S	P	E	K	L	D	N	Q	G	F	A	L	P	G	S	R
Template Known Secondary structure									G	G	G																.	.	.	.	.	.																				T	T				S					S	S	S									T	T		B		T	T
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.							.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	L	P	D	N	S	A	P	Y	T	S	T	I	V	F	L	V	R	K	G	N	P	K	Q	I	H	D	W	N	D	L	I	K	P	G	V	S	V	I	T	P	N	P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L	H	H	N	N	N	D	Q	A	K	A	Q	D	F	V	R	A	L	Y
Query Conservation
Alig confidence			.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	.	.	.	.	.	.	T	Y	A	I	G	K	L	V	L	W	S	A	K	P	G	L	V	D	N	Q	G	K	V	L	A	G	N	G	W	R	H	I	A	I	S	N	P	Q	I	A	P	Y	G	L	A	G	T	Q	V	L	T	H	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	K	L	T
Template Known Secondary structure			.	.	.	.	.	.												S	S	T	T	T	S		T	T	S	G	G	G	G	S	S	S		S							T	T	T														T	T		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76							.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.														.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	V	E	V	L	D	S	G	A	R	G	S	T	N	T	F	V	E	R	G	I	G	D	V	L	I	A	W	E	N	E	A	L	L	A	A	N	E	L	G	K	D	K	F	E	I	V	T	P	S	E	S	I	L	A	E	P	T	V	S	V	V	D	K	V	V	E	K	K	G	T	K	E	V	A	E	A	Y	L
Query Conservation
Alig confidence																																								.	.																.	.	.
Template Conservation																																								.	.																.	.	.
Template Sequence		A	Q	E	R	I	V	E	A	N	S	V	G	Q	A	H	S	Q	T	A	S	G	A	A	D	L	G	F	V	A	L	A	Q	I	I	Q	A	A	A	.	.	K	I	P	G	S	H	W	F	P	P	A	N	Y	Y	E	.	.	.	P	I	V	Q	Q	A	V	I	T	K	S	T	A	E	K	A	N	A	E	Q	F	M
Template Known Secondary structure			T	T						S	S										T	T	S	S	S						G	G	G	T			T	T	S	.	.			S	S							G	G	G	S		.	.	.									B	T	T		S
Template Predicted Secondary structure																																								.	.																.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	L	Y	S	P	E	G	Q	E	I	A	A	K	N	Y	Y	R	P	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	W	M	K	G	P	K	A	V	A	I	I	K	A	A	G	Y	V	L	P
Template Known Secondary structure				T	T	S										T	T		B
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions