Job Description P0AG78 Confidence 95.55% Date Wed Jan 25 15:20:33 GMT 2012 Rank 99 Aligned Residues 188 % Identity 14% Template c3uifA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sulfonate abc transporter, periplasmic sulfonate-binding PDBTitle: crystal structure of putative sulfonate abc transporter, periplasmic2 sulfonate-binding protein ssua from methylobacillus flagellatus kt Resolution 2.60 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		F	S	A	H	W	K	Q	Q	T	G	D	N	V	V	I	R	Q	S	H	.	G	G	S	G	K	Q	A	T	S	V	I	N	G	I	E	A	D	V	V	T	L	A	L	A	Y	D	V	D	A	I	A	E	R	G	R	I	D	K	E	W	I	K	R	L	P	D	N	S	A	P	Y	T	S	T	I	V	F	L	V	R
Query Conservation																					.
Alig confidence										.											.																																						.	.	.	.	.	.	.
Template Conservation										.																																																	.	.	.	.	.	.	.
Template Sequence		F	P	E	E	L	R	K	Q	.	G	I	K	V	E	W	V	P	A	A	X	A	S	V	G	P	V	I	N	E	G	F	A	S	G	K	I	D	F	G	I	Y	G	D	L	P	P	I	I	L	N	A	S	K	P	T	V	Q	.	.	.	.	.	.	.	L	V	A	P	W	G	T	T	S	N	S	Y	L	V	V	P
Template Known Secondary structure									T	.	T										T	T												T	T									S										S					.	.	.	.	.	.	.
Template Predicted Secondary structure										.																																																	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.								.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	N	P	K	Q	I	H	D	W	N	D	L	I	K	P	G	V	S	V	I	T	P	N	P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L	H	H	N	N	N	D	Q	A	K	A	Q	D	F	V	R	A	L	Y	K	N	V	E	V	L	D	S	G	A	R	G	S	T	N	T	F	V	E
Query Conservation
Alig confidence						.	.								.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.								.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	S	T	.	.	A	K	S	I	K	D	L	.	.	.	.	K	G	K	K	I	A	L	H	R	G	R	P	W	E	L	A	F	S	N	L	L	Q	S	E	G	L	T	F	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	I	V	N	V	N	P	Q	V	G	A	A	A	L	A
Template Known Secondary structure		T	T			.	.			S	G	G	G	G	.	.	.	.	T	T	S						T	T	S	T												T	T			G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure						.	.								.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.			.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	I	G	D	V	L	I	A	W	E	N	E	A	L	L	A	A	N	E	L	G	K	D	K	F	E	I	V	T	P	S	E	S	I	L	A	E	P	T	V	S	V	V	D	K	V	V	E	K	K	G	T	K	E	V	A	E	A	Y	L	K
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		S	G	T	V	D	G	F	F	S	L	F	D	S	Y	I	L	E	D	R	.	.	G	V	G	K	I	I	W	S	T	K	T	A	P	V	D	W	K	L	X	G	G	V	W	A	R	N	D	F	V	K	Q	N	P	E	I	T	Q	A	I	V	T
Template Known Secondary structure			T	S	S	S					S	T	T							T	.	.	T	S							G	G	G	S		G	G	G	S
Template Predicted Secondary structure																					.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions