Job Description P0AG78 Confidence 98.06% Date Wed Jan 25 15:20:33 GMT 2012 Rank 90 Aligned Residues 222 % Identity 16% Template c3tqwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:methionine-binding protein; PDBTitle: structure of a abc transporter, periplasmic substrate-binding protein2 from coxiella burnetii Resolution 2.00 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	Y	D	P	T	R	E	L	Y	E	Q	Y	N	K	A	F	S	A	H	W	K	Q	Q	T	G	D	N	V	V	I	R	Q	S	H	G	G	S	G	K	Q	A	T	S	V	I	N	G	I	E	A	D	V	V	T	L	A	L	A	Y	D	V	D	A	I	A	E	R	G	R	I	D	K	E	W	I	K	R	L	P
Query Conservation
Alig confidence																							.	.	.	.								.																	.																							.	.	.	.	.	.
Template Conservation																							.	.	.	.								.																	.																							.	.	.	.	.	.
Template Sequence		T	I	A	G	P	E	T	Q	L	X	E	V	A	K	Q	V	A	L	N	R	Y	.	.	.	.	G	L	H	V	N	I	I	.	T	F	S	D	Y	N	T	P	N	E	A	L	A	D	G	S	.	V	D	A	N	X	F	Q	H	L	P	Y	L	K	A	Q	I	E	X	R	G	Y	K	.	.	.	.	.	.	I	V
Template Known Secondary structure				T	T																		.	.	.	.								.			S		T	T	S							T	T	S	.		S																					.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.								.																	.																							.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.							.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	S	A	P	Y	T	S	T	I	V	F	L	V	R	K	G	N	P	K	Q	I	H	D	W	N	D	L	I	K	P	G	V	S	V	I	T	P	N	P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L	H	H	N	N	N	D	Q	A	K	A	Q	D	F	V	R	A	L	Y	K	N	V	E
Query Conservation
Alig confidence																			.	.	.	.	.									.	.	.																																				.	.	.
Template Conservation																			.	.	.	.	.									.	.	.																																				.	.	.
Template Sequence		S	I	G	K	T	F	V	Y	P	X	G	L	Y	S	K	K	I	.	.	.	.	.	T	A	L	T	Q	L	K	T	.	.	.	G	A	K	I	A	V	P	S	D	P	S	N	E	A	R	A	L	L	L	L	E	K	A	Q	L	I	Q	L	K	T	H	I	N	A	T	.	.	.	P	X	D	I	A	S	N	P	K
Template Known Secondary structure																S	S		.	.	.	.	.	S	S	G	G	G			T	.	.	.	T								S														T	T	S											.	.	.	G	G	G					T	T
Template Predicted Secondary structure																			.	.	.	.	.									.	.	.																																				.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	D	S	G	A	R	G	S	T	N	T	F	V	E	R	G	I	G	D	V	L	I	A	W	E	N	E	A	L	L	A	A	N	E	L	G	K	D	K	F	E	I	V	T	P	S	E	S	I	L	A	E	P	T	V	S	V	V	D	K	V	V	E	K	K	G	T	K	E	V	A	E	A	Y	L	K	Y	L	Y
Query Conservation
Alig confidence																																																		.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.
Template Sequence		K	L	K	I	V	E	L	D	A	A	Q	L	S	R	S	L	G	D	V	D	L	A	A	I	N	T	N	Y	A	I	P	A	G	L	S	P	S	R	D	A	L	L	T	E	G	P	N	S	.	.	.	.	.	.	P	Y	A	N	V	V	A	V	R	E	D	D	K	N	D	P	R	L	K	Q	L	V	S	A	L	H
Template Known Secondary structure										G	G	G	G	G	G		T	T	T		S										G	G	G	T			T	T	T	T		S					S	S	S	.	.	.	.	.	.	S									G	G	G	T	T												T
Template Predicted Secondary structure																																																		.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	E	G	Q	E	I	A	A	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	A	V	L	S	A	A	K	K	I
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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