Job Description P0AG78 Confidence 95.50% Date Wed Jan 25 15:20:33 GMT 2012 Rank 100 Aligned Residues 216 % Identity 14% Template c3qslA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: structure of cae31940 from bordetella bronchiseptica rb50 Resolution 2.00 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	I	Q	L	L	N	V	S	Y	D	P	T	R	E	L	Y	E	Q	Y	N	K	A	F	S	A	H	W	K	Q	Q	T	G	D	N	V	V	I	R	Q	S	H	G	G	S	G	K	Q	A	T	S	V	I	N	G	I	E	A	D	V	V	T	L	A	L	A	Y	D	V	D	A	I	A	E	R	G	R	I	D	K
Query Conservation
Alig confidence																																									.																	.																							.
Template Conservation																																									.																	.																							.
Template Sequence		E	K	A	K	V	Q	I	A	V	G	G	K	P	L	I	Y	Y	L	P	L	T	I	A	E	V	K	G	F	F	K	D	E	G	L	D	V	S	I	A	.	D	F	A	G	G	S	K	A	L	Q	A	V	V	G	G	S	.	A	D	V	V	S	G	A	F	E	H	T	L	S	L	Q	A	K	G	Q	F	Y	R	.
Template Known Secondary structure		S		S							S		T	T	S	G	G	G									T	T					T	T							.			S	S										T	T	S	.		S						T									T	T					.
Template Predicted Secondary structure																																									.																	.																							.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	I	K	R	L	P	D	N	S	A	P	Y	T	S	T	I	V	F	L	V	R	K	G	N	P	K	Q	I	H	D	W	N	D	L	I	K	P	G	V	S	V	I	T	P	N	P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L	H	H	N	N	N	D	Q	A	K	A	Q	D	F	V	R
Query Conservation
Alig confidence		.	.	.	.	.	.																														.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																														.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	A	F	A	L	Q	G	R	A	P	X	I	G	V	G	V	S	K	K	N	L	P	G	Y	K	G	P	A	D	L	.	.	.	.	K	G	R	K	I	G	V	T	A	P	G	S	S	T	N	X	V	V	N	F	F	L	A	K	H	G	L	K	A	S	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.					S	B	S	S									T	T	T		T	T			S	G	G	G	G	.	.	.	.	T	T						S	S	T	T	S													T	T			G	G	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																														.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.						.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		A	L	Y	K	N	V	E	V	L	D	S	G	A	R	G	S	T	N	T	F	V	E	R	G	I	G	D	V	L	I	A	W	E	N	E	A	L	L	A	A	N	E	L	G	K	D	K	F	E	I	V	T	P	S	E	S	I	L	.	.	.	.	.	A	E	P	T	V	S	V	V	D	K	V	V	E	K	K	G	T
Query Conservation																																																												.	.	.	.	.
Alig confidence		.	.	.	.																																																							.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	D	V	S	F	I	G	V	G	A	G	A	G	A	V	T	A	L	R	S	G	Q	I	D	A	I	S	N	T	D	P	V	V	S	X	L	E	T	S	G	D	I	Q	I	I	V	D	T	R	T	L	K	D	T	K	E	I	F	G	G	N	X	P	A	G	C	L	Y	A	P	Q	A	F	V	D	A	N
Template Known Secondary structure		.	.	.	.	G	S							S	S										T	S		S						T	T								T	T									S	S									S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		255	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	V	A	E	A	Y	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	N	T	A	Q	A	L	T	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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