Job Description P0AG78 Confidence 99.60% Date Wed Jan 25 15:20:33 GMT 2012 Rank 76 Aligned Residues 262 % Identity 13% Template c3i3vC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:probable secreted solute-binding lipoprotein; PDBTitle: crystal structure of probable secreted solute-binding2 lipoprotein from streptomyces coelicolor Resolution 2.30 Å

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		19	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure												.	.	.	.																																					.	.	.
Query SS confidence												.	.	.	.																																					.	.	.
Query Sequence		A	K	D	I	Q	L	L	N	V	S	.	.	.	.	Y	D	P	T	R	E	L	Y	E	Q	Y	N	K	A	F	S	A	H	W	K	Q	Q	T	G	D	N	V	V	I	R	Q	S	H	G	G	S	.	.	.	G	K	Q	A	T	S	V	I	N	G	I	E	A	D	V	V	T	L	A	L	A	Y	D	V	D	A	I
Query Conservation												.	.	.	.																																					.	.	.
Alig confidence												.	.	.	.																			.	.	.	.	.														.	.	.
Template Conservation																																		.	.	.	.	.
Template Sequence		S	D	P	D	T	L	V	V	H	T	Q	L	G	T	T	A	P	G	S	P	T	Y	L	A	A	V	D	R	F	R	E	E	.	.	.	.	.	N	P	G	V	K	I	K	N	L	V	N	G	D	D	L	A	Q	V	Y	E	T	S	R	L	A	R	K	E	A	D	V	V	X	V	N	L	Y	D	K	T	L	A	W
Template Known Secondary structure			S	T	T							S		S	S	S	S	T	T															.	.	.	.	.		T	T									S	T	T											T	T				S							S	T	T	G	G	G
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.																							.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																.	.
Query Sequence		A	E	R	G	R	I	D	K	E	W	I	K	R	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	S	A	P	Y	T	S	T	I	V	F	L	V	R	K	G	N	P	K	.	.	.	.	.	.	Q	I	H	D	W	N	D	L	I	K	P	G	V	S	V	.	.
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		T	D	V	G	A	T	V	D	V	K	P	Y	L	D	D	W	G	L	R	G	R	V	L	P	A	A	L	A	D	W	T	D	D	E	G	R	V	R	A	F	P	Y	F	A	T	N	W	P	V	A	Y	N	R	A	L	L	D	R	A	G	V	D	A	I	P	T	T	G	D	Q	L	I	A	A	A	R	K	L	R	A
Template Known Secondary structure					T	S	S									G	G	G		T	T	S	B								T	B		T	T	S		B		S	B																				T			S				B
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
						142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.													.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Query SS confidence		.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Query Sequence		.	.	.	.	I	T	P	N	P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L	H	H	.	.	.	.	.	.	.	.	.	.	.	.	N	N	N	D	Q	A	K	A	Q	D	F	V	R	A	L	Y	K	N	V	E	V	.	.	.	L	D	S	G	A	R	G	S	T	N	T	F	V	E	R
Query Conservation		.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Alig confidence		.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		K	G	I	A	P	V	T	V	G	G	N	D	W	T	G	Q	K	L	L	A	Q	I	I	Q	T	F	L	S	Q	D	E	A	R	H	V	Y	S	T	G	D	F	G	V	R	G	A	R	L	G	I	E	Y	F	A	H	L	R	D	A	G	V	F	A	D	K	A	Q	G	L	T	S	D	S	X	T	T	Q	F	N	T
Template Known Secondary structure		T	T								T	T	S												G	G	G													T		T	T	S																T	T		B		T	T	G	G	G												T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.								.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.																						.
Query SS confidence																																.	.	.	.	.	.	.																						.
Query Sequence		G	I	G	D	V	L	I	A	W	E	N	E	A	L	L	A	A	N	E	L	G	K	D	K	F	E	I	V	T	P	.	.	.	.	.	.	.	S	E	S	I	L	A	E	P	T	V	S	V	V	D	K	V	V	E	K	K	G	.	T	K	E	V	A	E	A	Y	L	K	Y	L	Y	S	P	E	G	Q	E	I	A
Query Conservation																																.	.	.	.	.	.	.																						.
Alig confidence																																.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		E	E	A	A	V	Q	S	A	X	S	S	A	L	A	K	V	P	E	K	V	A	G	H	T	E	V	G	G	W	P	L	A	D	G	A	A	H	D	G	P	T	V	I	R	A	Y	T	L	I	G	F	W	I	S	P	N	G	V	R	K	I	E	Q	V	E	K	F	L	R	F	X	Y	R	P	D	V	V	A	R	F
Template Known Secondary structure		T	S												T	T	S							T						B		B		T	T		S	S	S	S									S	S											T												T	S
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		275	.	.		.	.	280	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		A	K	N	.	Y	Y	R	P	R	D	A	E
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		V	T	E	S	G	R	D	X	A	L	R	T
Template Known Secondary structure										S	B
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions