Job Description P0AG78 Confidence 99.92% Date Wed Jan 25 15:20:33 GMT 2012 Rank 20 Aligned Residues 277 % Identity 15% Template c2vozA_ PDB info PDB header:metal-binding protein Chain: A: PDB Molecule:periplasmic iron-binding protein; PDBTitle: apo futa2 from synechocystis pcc6803 Resolution 1.70 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		I	Q	L	L	N	V	S	Y	D	P	T	R	E	L	Y	E	Q	Y	N	K	A	F	S	A	H	W	K	Q	Q	T	G	D	N	V	V	I	R	Q	S	H	G	G	S	G	K	Q	A	T	S	V	I	.	.	.	N	G	I	E	A	D	V	V	T	L	A	L	A	Y	D	V	D	A	I	A	E	R	G	R	I	D
Query Conservation																																																					.	.	.
Alig confidence												.														.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation												.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	I	N	L	Y	S	S	R	H	.	Y	N	T	D	D	A	L	Y	D	A	F	G	E	.	.	.	.	.	.	.	.	.	.	.	V	N	L	I	E	A	S	A	E	E	L	I	E	R	I	Q	S	E	G	A	N	S	P	G	D	I	L	F	T	V	D	A	G	M	L	W	R	A	E	Q	A	G	L	F	Q
Template Known Secondary structure									S			.		T	T									S		.	.	.	.	.	.	.	.	.	.	.																		T	G	G	G				S						S										T	T		B
Template Predicted Secondary structure												.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.												.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		99	100	.	.	.	.	.	.													.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		K	E	W	I	K	R	L	P	.	.	.	.	.	.	.	.	.	.	.	.	D	N	S	A	P	Y	T	S	T	I	V	F	L	V	R	K	G	N	P	K	Q	.	.	I	H	D	W	N	D	L	I	K	P	G	V	S	V	I	T	P	N	P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		P	V	R	S	G	K	L	N	E	R	I	P	E	N	L	R	H	P	D	G	L	W	Y	G	F	T	Q	R	A	R	V	L	Y	Y	S	R	D	R	V	N	P	A	D	L	S	T	Y	E	A	L	A	D	P	Q	W	R	G	K	I	L	V	R	P	S	S	N	V	Y	N	L	S	L	T	A	S	R	I	A	I	H
Template Known Secondary structure												S		G	G	G	B		T	T	S	S															T	T	T			G	G	G				S	G	G	G	G	S	G	G	G	T	T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.									.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.
Query Sequence		H	H	N	N	N	D	Q	A	K	A	Q	D	F	V	R	A	L	Y	K	N	V	E	V	L	D	S	G	A	R	G	S	T	N	T	F	V	E	R	G	I	G	D	V	L	I	A	W	E	N	E	A	L	L	A	A	N	E	L	G	K	D	.	.	.	.	.	.	.	.	K	F	E	I	V	T	P	S	E	S	I
Query Conservation																																																															.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.																																																								.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.
Template Sequence		G	.	.	.	.	.	E	P	E	T	R	R	W	L	Q	G	L	V	G	N	F	A	R	Q	P	E	G	N	D	T	A	Q	I	R	A	I	A	A	G	I	G	D	V	A	I	A	N	S	Y	Y	Y	I	R	L	Q	K	S	T	D	P	A	D	Q	E	V	V	E	K	V	S	L	F	F	P	N	T	G	S	G	E
Template Known Secondary structure			.	.	.	.	.														T	B	S	S	S			S											T	T	S		S																																	S		S	T	T	S
Template Predicted Secondary structure			.	.	.	.	.
Template SS confidence
		182						.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.							.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.											.	.	.	.	.	.
Query SS confidence																																											.											.	.	.	.	.	.
Query Sequence		L	A	E	P	T	V	S	V	V	D	K	V	V	E	K	K	G	T	K	E	V	A	E	A	Y	L	K	Y	L	Y	S	P	E	G	Q	E	I	A	A	K	N	.	Y	Y	R	P	R	D	A	E	V	A	.	.	.	.	.	.	K	K	Y	E	N	A	F	P	K	L	K	L	F	T	I	D	E	E	F	G	G	W
Query Conservation																																											.											.	.	.	.	.	.
Alig confidence																																											.											.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	T	H	V	N	V	S	G	A	G	V	L	K	N	A	P	N	R	D	A	A	I	A	F	L	E	Y	L	A	S	D	D	A	Q	R	Y	F	A	E	G	N	N	E	Y	P	V	I	P	G	V	P	I	D	P	V	L	A	A	H	G	Q	L	K	G	D	P	L	N	V	S	N	L	G	R	Y	Q	P	D	S
Template Known Secondary structure				B										B	T	T		T	T												T	S											T	T				S	S	T	T	S								T	T					B			S		T						T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	A	Q	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	L	M	N	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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