Job Description P0AG78 Confidence 52.34% Date Wed Jan 25 15:20:33 GMT 2012 Rank 123 Aligned Residues 199 % Identity 16% Template c2q89A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative abc transporter amino acid-binding protein; PDBTitle: crystal structure of ehub in complex with hydroxyectoine Resolution 2.30 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	N	K	A	F	S	A	H	W	K	Q	Q	T	G	D	N	V	V	I	R	Q	S	H	G	G	S	G	K	Q	A	T	S	V	I	N	G	I	E	A	D	V	V	T	L	A	L	A	Y	D	V	D	A	I	A	E	R	G	R	I	D	K	E	W	I	K	R	L	P	D	N	S	A	P	Y	T	S	T	I	V
Query Conservation
Alig confidence										.	.	.	.												.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.												.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	A	R	E	I	F	K	.	.	.	.	R	L	G	V	A	D	V	V	A	S	I	.	.	S	E	Y	G	A	M	I	P	G	L	Q	A	G	R	H	D	A	I	T	A	G	L	F	M	K	P	E	R	C	A	A	.	.	.	.	.	.	.	.	.	.	.	V	A	Y	S	Q	P	I	L	C	D	A	E	A
Template Known Secondary structure										.	.	.	.		T	T									.	.			G	G	G							T	T	S		S				S			B							T	T	.	.	.	.	.	.	.	.	.	.	.	S				S
Template Predicted Secondary structure										.	.	.	.												.	.																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.												.	90	.	.	.	.	.	.	.	.	.	100	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	V	R	K	G	N	P	K	Q	I	H	D	W	N	D	L	I	K	P	G	V	S	V	I	T	P	N	P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L	H	H	N	N	N	D	Q	A	K	A	Q	D	F	V	R	A	L	Y	K	N	V	E	V	L	D	S	G	A	R	G	S	T	N
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	L	K	K	G	N	P	L	G	L	K	S	Y	K	D	I	A	D	N	P	D	A	K	I	G	A	P	G	G	G	T	E	E	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	E	A	G	V	P	R	D	R	V	I	V	V	P	D	G	Q	S	G	L
Template Known Secondary structure						T	T		T	T				B						T		T	T							T	T	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T			G	G	G					S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																								.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		T	F	V	E	R	G	I	G	D	V	L	I	A	W	E	N	E	A	L	L	A	A	N	E	L	G	K	D	K	F	E	I	V	T	P	S	E	S	I	L	A	E	P	T	V	S	V	V	D	K	V	V	E	K	K	G	T	K	E	V	A	E	A	Y	L	K	Y	L	Y	S	P	.	.	.	.	E	G	Q	E	I
Query Conservation																																																																									.	.	.	.
Alig confidence																																														.	.	.	.	.																							.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		K	M	L	Q	D	G	R	I	D	V	Y	S	L	P	V	L	S	I	N	D	L	V	S	K	A	N	D	P	N	V	E	V	L	A	P	V	E	G	A	P	V	Y	C	D	.	.	.	.	.	G	A	A	F	R	K	G	D	E	A	L	R	D	A	F	D	V	E	L	A	K	L	K	E	S	G	E	F	A	K	I
Template Known Secondary structure							T	S		S																	T		T	T						S		B	T						B	.	.	.	.	.						G	G	G																		T
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		274	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	N	Y	Y	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	P	Y	G	F	S	A
Template Known Secondary structure			G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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