Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADW6
Confidence37.57%DateThu Jan 5 11:21:59 GMT 2012
Rank238Aligned Residues52
% Identity35%Templated3bmva4
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   162.......170.........180.........190..
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Query Sequence  DFACYQRTTQLARQRGLKVCSHLIVGLPGEG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  SFTDFQNLINTAHAHNIKVIIDFAPNHTSPASETDPTYAENGRLYDNGTLLGGYTNDTNGYFHHYGGTDFSSYEDGIYRN
Template Known Secondary structure 
TT

TT

SS
TTSTTTT
TT
STT
TT

B

S
B


SSSB
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   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   193......200.........210...
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Query Sequence  . . . . . . . . . . . . . . QAECLQTLERVVETGVDGIKL
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Template Conservation       


  

 
          
 
 





 
Template Sequence  LFDLADLNQQNSTIDSYLKSAIKVWLDMGIDGIRL
Template Known Secondary structure  STTB
TTSTT

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   195....200.........210.........220.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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