Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADW6
Confidence53.92%DateThu Jan 5 11:21:59 GMT 2012
Rank196Aligned Residues140
% Identity15%Templated1v6ya_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160 .........170.........180...... ..
Predicted Secondary structure 


















.




...

Query SS confidence 















































.

























. . .

Query Sequence  LCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRG. HDFACYQRTTQLARQRGLKVCSHLIV. . . GL
Query Conservation 
   



 
  
 
  
   
     
 

 



     
  
 

.                

 
    
 ...

Alig confidence 







































......

.

























...

Template Conservation 

 
                  

     
   
   

 ...... 
       
  
      

 
           
Template Sequence  FGTAIASGKLGDSAYTTIASREFNMVTAENEMKIDATEPQ. . . . . . RGQFNFSAGDRVYNWAVQNGKQVRGHTLAWHSQQ
Template Known Secondary structure 
GGGTT

SSSTTS
SB......TTB


TT
SSS
Template Predicted Secondary structure 














......













Template SS confidence 















































































   16...20.........30.........40.........50..... ....60.........70.........80.........
 
   189190 .........200.........210.........220.........230.........240.........250........
Predicted Secondary structure 

........






















Query SS confidence 

. . . . . . . .



































































Query Sequence  PG. . . . . . . . EGQAECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIY
Query Conservation 

........

 
    
      
    
    
    

 
      
        
        
  
     
Alig confidence 

........



































































Template Conservation 
 
                
  
  

 
 
  


 


                        
   

  

 
  
Template Sequence  PGWMQSLSGSTLRQAMIDHINGVMGHYKGKIAQWDVVNEAFSDDGSGGRRDSNLQRTGNDWIEVAFRTARAADPAAKL
Template Known Secondary structure 


TTT



B
SSSS

B


TTGGG
TT
TTS
Template Predicted Secondary structure 





























Template SS confidence 













































































   90.........100.........110.........120.........130.........140.........150.........160.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions