Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADW6
Confidence86.58%DateThu Jan 5 11:21:59 GMT 2012
Rank36Aligned Residues87
% Identity26%Templated1cgta4
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125.. ..130.........140........ .150.........160. ........170.........180....
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Query Sequence  AVL. . DLLCEYKDQGYEVWLELGLQT. . . . . . . . . . . . . . . . . AHDKTLHRINRGH. DFACYQRTTQLARQRGLKVCSHL
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Template Sequence  NKINDNYFSDLGVTA. . LWISQPVENIFATINYSGVTNTAYHGYWARDFKKTNPYFGTMADFQNLITTAHAKGIKIVIDF
Template Known Secondary structure  TTT

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S
TT

TTS
S
TTT

TT
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   5960.........70... ......80.........90.........100.........110.........120.........130......
 
   185....190.. .......200.
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Query Sequence  IVGLPGEG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QAECLQTLE
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Template Sequence  APNHTSPAMETDTSFAENGRLYDNGTLVGGYTNDTNGYFHHNGGSDFSSLENGIYKNLYDLADFNHNNATIDKYFKDAIK
Template Known Secondary structure 
TT

TT
TTSTTTT
TT
STT
TT

B

S
B


SSSBBTTB
TTS
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   137..140.........150.........160.........170.........180.........190.........200.........210......
 
   202.......210...
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Query Sequence  RVVETGVDGIKL
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Template Sequence  LWLDMGVDGIRV
Template Known Secondary structure  TT

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   217..220........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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