 |
Job Description | P0ADW6 | Confidence | 70.98% | Date | Thu Jan 5 11:21:59 GMT 2012 |
Rank | 131 | Aligned Residues | 66 |
% Identity | 15% | Template | c3amkA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:os06g0726400 protein; |
PDBTitle: structure of the starch branching enzyme i (bei) from oryza sativa l
|
Resolution | 1.90 Å |
|
 |
  |   |
124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | V | L | D | L | L | C | E | Y | K | D | Q | G | Y | E | V | W | L | E | L | G | L | Q | T | A | H | D | K | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | H | R | I | N | R | G | H | D | F | A | C | Y | Q | R | T | T | Q | L | A | R | Q | R | G | L | K | V | C | S | H | L | I | V | G | L | P | G | E | G |
Query Conservation |   |
  |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|   |
|
|
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|   |
|
|
|
|   |
|   |
| . | . | . |
|
|
|   |
|   |   |   |   |   |   |
|
|
|   |   |   |   |
|   |
|
|   |   |   |
|
|
|   |   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |
|
|
|
|
|
|   |
|
|   |   |   |   |
Template Sequence |   |
D | N | V | L | P | R | I | R | A | N | N | Y | N | T | V | Q | L | . |
. |
. |
M | A | I | M | E | H | S | Y | Y | A | S | F | G | Y | H | V | T | N | F | F | A | V | S | S | R | S | G | T | P | E | D | L | K | Y | L | V | D | K | A | H | S | L | G | L | R | V | L | M | D | V | V | H | S | H | A | S | N | N |
Template Known Secondary structure |   |
 |  | T |  |  |  |  |  |  | T | T |
|
|  |  |  |  | . | . | . |
| S |
|  |  |
| S |
| G | G | G | T | T |
| S |
| S |  |  |  |  |  |
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|
| S |
|  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | |
|
|
. | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|