Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADW6
Confidence53.92%DateThu Jan 5 11:21:59 GMT 2012
Rank195Aligned Residues98
% Identity15%Templatec3aamA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endonuclease iv; PDBTitle: crystal structure of endonuclease iv from thermus thermophilus hb8
Resolution1.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160.........170......... 180.........190 ....
Predicted Secondary structure 

















.



........

Query SS confidence 























































.










. . . . . . . .



Query Sequence  DAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLK. VCSHLIVGLPG. . . . . . . . EGQA
Query Conservation   
 
  
   
     
 

 



     
  
 

                

 .
    
 



........

 
Alig confidence 



















.






.......




















.










........



Template Conservation     
  
   

  


   .       .......          
       

     
           
       
Template Sequence  AGAVEEATALGLTAFQIFAK. SPRSWRP. . . . . . . RALSPAEVEAFRALREASGGLPAVIHASYLVNLGAEGELWEKSVA
Template Known Secondary structure  T
S
SS.
TT

S
.......



TT




TT

TT
SST
Template Predicted Secondary structure 





.






.......

















Template SS confidence 















































































   17..20.........30...... ...40... ......50.........60.........70.........80........
 
   195....200.........210.........220.........
Predicted Secondary structure 







Query SS confidence 


































Query Sequence  ECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWE
Query Conservation      
      
    
    
    

 
     
Alig confidence 


































Template Conservation       
  
  


  

 
 
             
Template Sequence  SLADDLEKAALLGVEYVVVHPGSGRPERVKEGALK
Template Known Secondary structure  T




BS
Template Predicted Secondary structure 










Template SS confidence 


































   8990.........100.........110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions