Job Description P0ADW6 Confidence 99.95% Date Thu Jan 5 11:21:59 GMT 2012 Rank 4 Aligned Residues 181 % Identity 19% Template c2qgqF_ PDB info PDB header:structural genomics, unknown function Chain: F: PDB Molecule:protein tm_1862; PDBTitle: crystal structure of tm_1862 from thermotoga maritima.2 northeast structural genomics consortium target vr77 Resolution 2.00 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																		.	.	.	.																								.
Query SS confidence																																																		.	.	.	.																								.
Query Sequence		C	T	F	C	N	V	A	S	F	A	D	E	A	Q	Q	H	R	S	I	A	E	Q	L	A	H	Q	A	N	L	V	N	R	A	K	R	Y	L	A	Y	F	Q	A	Y	T	S	T	F	A	.	.	.	.	E	V	Q	V	L	R	S	M	Y	Q	Q	A	V	S	Q	A	N	I	V	G	L	C	V	.	G	T	R	P
Query Conservation																																																		.	.	.	.																								.
Alig confidence													.																																					.	.	.	.																								.
Template Conservation													.
Template Sequence		R	P	Y	A	Y	V	K	I	S	D	G	.	S	L	R	S	R	S	I	E	D	I	T	R	E	V	E	D	L	L	K	E	G	K	K	E	I	I	L	V	A	Q	D	T	T	S	Y	G	I	D	L	Y	R	K	Q	A	L	P	D	L	L	R	R	L	N	S	L	N	G	E	F	W	I	R	V	X	Y	L	H	P
Template Known Secondary structure			S							B			.				B																T	T									S		G	G	G	T	T	T	T	T	T	S	S												T	S	S	S	S										G
Template Predicted Secondary structure													.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																	.	.																																											.	.
Query SS confidence																	.	.																																											.	.
Query Sequence		D	C	V	P	D	A	V	L	D	L	L	C	E	Y	K	.	.	D	Q	G	Y	E	V	W	L	E	L	G	L	Q	T	A	H	D	K	T	L	H	R	I	N	R	G	H	D	F	A	C	Y	Q	R	T	T	Q	L	A	R	Q	R	.	.	G	L	K	V	C	S	H	L	I	V	G	L	P	G	E	G	Q	A	E
Query Conservation																	.	.																																											.	.
Alig confidence																	.	.				.	.	.	.																																				.	.
Template Conservation																						.	.	.	.
Template Sequence		D	H	L	T	E	E	I	I	S	A	X	L	E	L	D	K	V	V	K	Y	.	.	.	.	F	D	V	P	V	Q	H	G	S	D	K	I	L	K	L	X	G	R	T	K	S	S	E	E	L	K	K	X	L	S	S	I	R	E	R	F	P	D	A	V	L	R	T	S	I	I	V	G	F	P	G	E	T	E	E	D
Template Known Secondary structure		G	G													T	T	B		S		.	.	.	.						B		S									T			S																	T	T										S		T	T
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250					.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	Q	T	L	E	R	V	V	E	T	G	V	D	G	I	K	L	H	P	L	H	I	V	K	G	S	I	M	A	K	A	W	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	E	L	K	Q	F	V	E	E	I	Q	F	D	K	L	G	A	F	V	Y	S	D	K	V	D	P	E	X	A	K	R	R	Q	E
Template Known Secondary structure															S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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