Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADW6
Confidence21.13%DateThu Jan 5 11:21:59 GMT 2012
Rank290Aligned Residues94
% Identity14%Templatec2p3eA_
PDB info PDB header:lyaseChain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of aq1208 from aquifex aeolicus
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.........130.........140.........150.........160 .........170.........180...... ..
Predicted Secondary structure 
















......




.....

Query SS confidence 








































. . . . . .

























. . . . .

Query Sequence  DCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRG. . . . . . HDFACYQRTTQLARQRGLKVCSHLIV. . . . . GL
Query Conservation 
 
  
 
  
   
     
 

 



     
  
 

......                

 
    
 .....

Alig confidence 




















.


















......

























.....

Template Conservation   


  
       
     
.
  
  
    
  
         


  

  
   
        
 


   


 
Template Sequence  DIVSGGELYLAKKAGIPPERI. VYAGVGKTEKELTDAVDSEILMFNVESRQELDVLNEIAGKLGKKARIAIRVNPSKFGV
Template Known Secondary structure  SSTT

GGG.
SS


TT
S

T




S
Template Predicted Secondary structure 






.






















Template SS confidence 















































































   84.....90.........100.... .....110.........120.........130.........140.........150.........160..
 
   189190.........200.........210....
Predicted Secondary structure 







Query SS confidence 

























Query Sequence  PGEGQAECLQTLERVVETGVDGIKLH
Query Conservation 



 
    
      
    
   
Alig confidence 

























Template Conservation     
       
     
 
 


 
Template Sequence  DIREAQKEYEYASKLENLEIVGIHCH
Template Known Secondary structure  GGGT
TT

Template Predicted Secondary structure 




Template SS confidence 

























   179180.........190.........200....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions