Job Description P0ADW6 Confidence 88.88% Date Thu Jan 5 11:21:59 GMT 2012 Rank 22 Aligned Residues 157 % Identity 11% Template c2ftpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		C	N	V	A	S	F	A	D	E	A	Q	Q	H	R	S	I	A	E	Q	L	A	H	Q	A	N	L	V	N	R	A	K	R	Y	L	.	A	Y	F	Q	A	Y	T	S	T	F	A	E	V	Q	V	L	R	S	M	Y	Q	Q	A	V	S	Q	A	N	I	V	G	L	C	V	G	T	R	P	D	C	V	P	D	A	V
Query Conservation																																				.
Alig confidence																																				.																																			.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.
Template Sequence		V	G	P	R	D	G	L	Q	N	E	K	Q	P	I	E	V	A	D	K	I	R	L	V	D	D	L	S	A	A	G	L	D	Y	I	E	V	G	S	F	V	S	P	K	W	V	P	Q	M	A	G	S	A	E	V	F	A	G	I	R	Q	R	P	G	V	T	Y	A	A	L	.	.	.	.	.	A	P	N	L	K	G
Template Known Secondary structure			T	T	T					T	S	S	S																	T	T		S								S		T	T	T		G	G	G	T	T								S				T	T	S						.	.	.	.	.			S
Template Predicted Secondary structure																																																																							.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.				.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.																								.	.								.	.	.
Query SS confidence																																						.	.																								.	.								.	.	.
Query Sequence		L	D	L	L	C	E	Y	K	D	Q	G	Y	E	V	W	L	E	L	G	L	Q	T	A	H	D	K	T	L	H	R	I	N	R	G	H	D	.	.	F	A	C	Y	Q	R	T	T	Q	L	A	R	Q	R	G	L	K	V	C	S	H	L	I	.	.	V	G	L	P	G	E	G	.	.	.	Q	A	E	C	L	Q	T
Query Conservation																																						.	.																								.	.								.	.	.
Alig confidence																				.	.	.	.															.	.																								.	.								.	.	.
Template Conservation																				.	.	.	.
Template Sequence		F	E	A	A	L	E	S	G	V	K	E	V	A	V	F	A	A	A	.	.	.	.	S	E	A	F	S	Q	R	N	I	N	C	S	I	K	D	S	L	E	R	F	V	P	V	L	E	A	A	R	Q	H	Q	V	R	V	R	G	Y	I	S	C	V	L	G	C	P	Y	D	G	D	V	D	P	R	Q	V	A	W	V
Template Known Secondary structure								T	T										S	.	.	.	.										S	S																			T	T										T	T		B	T	T	T	B
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	R	V	V	E	T	G	V	D	G	I	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	E	L	Q	Q	M	G	C	Y	E	V	S	L
Template Known Secondary structure								T	T		S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions