Job Description P0ADW6 Confidence 80.89% Date Thu Jan 5 11:21:59 GMT 2012 Rank 87 Aligned Residues 87 % Identity 15% Template c1jgiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:amylosucrase; PDBTitle: crystal structure of the active site mutant glu328gln of2 amylosucrase from neisseria polysaccharea in complex with3 the natural substrate sucrose Resolution 2.00 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.									.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.														.																																.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.														.																																.	.	.
Query Sequence		A	V	L	D	L	L	C	E	Y	K	D	Q	G	Y	E	V	W	L	E	L	G	L	Q	T	.	.	.	.	.	.	.	.	A	H	D	K	T	L	H	R	I	N	R	G	H	.	D	F	A	C	Y	Q	R	T	T	Q	L	A	R	Q	R	G	L	K	V	C	S	H	L	I	V	G	L	P	G	E	G	.	.	.
Query Conservation																										.	.	.	.	.	.	.	.														.																																.	.	.
Alig confidence															.	.										.	.	.	.	.	.	.	.														.																																.	.	.
Template Conservation															.	.
Template Sequence		D	K	I	P	Y	F	Q	E	L	G	L	T	Y	.	.	L	Y	L	M	P	L	F	K	C	P	E	G	K	S	D	G	G	Y	A	V	S	S	Y	R	D	V	N	P	A	L	G	T	I	G	D	L	R	E	V	I	A	A	L	H	E	A	G	I	S	A	V	V	D	F	I	F	N	H	T	S	N	E	H	E	W
Template Known Secondary structure			T								T		S		.	.							B				S	S		S	T	T	T	T	S		S		S	S	S	B		T	T	T																T	T										S				T	T	S
Template Predicted Secondary structure															.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
																																																																								193	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	E	C	L	Q	T	L	E	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Q	R	C	A	A	G	D	P	L	F	D	N	F	Y	Y	I	F	P	D	R	R	M	P	D	Q	Y	D	R	T	L	R	E	I	F	P	D	Q	H	P	G	G	F	S	Q	L	E	D	G	R	W	V	W	T	T	F	N	S	F	Q	W	D	L	N	Y	S	N	P	W	V	F	R	A	M	A	G	E	M	L	F
Template Known Secondary structure								T		G	G	G	T	T	S	B				S	S	S								T	S				S		T	T	T		S	T	T					T	T	S						S	S		T	T				B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	E	T	G	V	D	G	I	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	N	L	G	V	D	I	L	R	M
Template Known Secondary structure				T	T	T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions