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Job DescriptionP08331
Confidence99.79%DateWed Jan 25 15:20:13 GMT 2012
Rank18Aligned Residues191
% Identity9%Templated3c9fa1
SCOP info5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   353......360.........370. ........380.........390.........400.........410.........420.........430.
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Query Sequence  SKPIGKSADNMYSYLALVQ. DDPTVQVVNNAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTF
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Template Sequence  DTLIGYVKTNYYVDYVPIDHPKSIFNLLALKILKTLPKSKHEERI. . . . . . . . . . . . . . . . TIINTGSIRYDLYKGPYTI
Template Known Secondary structure 

SS
BBSSSS
TTSTTBTTGGGS


TT

................GGG

S
B
S
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   338.340.........350.........360.........370.........380.. .......390.........400.
 
   432.......440.........450.........460.........470.........480.........490.........500.........510.
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Query Sequence  RNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDGEC
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Template Sequence  DSKFIVSPFENIWVNITVPKSVATKVAAKLNDYISASRLKPPHQYDLQVQ. . . . . . . QEKLPKGYVTHDDFGAD. . . . . .
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   402.......410.........420.........430.........440.........450. ........460........
 
   512.......520....... ..530.........540......... 550.........560.........570.....
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Query Sequence  QMINANAERIKNLTFN. . . . . . . . . . . GKPIDPNAMFLVATNNYRAYGG. . . . . KFAGTGDSHIAFASPDENRSVLAAWI
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Template Sequence  . . . . . . GDDTLHRAVVNFPVPNVIQSVEINDEVDSPVNLVFYSFITPNIIWALKELNFSTEQVPTPYSDIYLGTLLNEFV
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S
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   484.....490.........500.........510.........520.........530.........540.........550.......
 
   576..
Predicted Secondary structure 
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Query Sequence  ADE
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Template Conservation     
Template Sequence  ANN
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 


   558.560
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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