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Job DescriptionP08331
Confidence100.00%DateWed Jan 25 15:20:13 GMT 2012
Rank13Aligned Residues194
% Identity19%Templated2z1aa1
SCOP info5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   352.......360........ .370.........380....... ..390.........400.........410.........420......
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Query Sequence  VSKPIGKSADNMYSYLA. . LVQDDPTVQVVNNAQKAYV. . . EHYIQGDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEK
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Template Sequence  MQQVIAEAKVDLVGERAVVRRRESNLGNLITDGMLWKTRNAGTQI. . . . . . . . . . . . . . . . . . . . . ALQNGGGIRASIPK
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SS
B


TTS

TGGGT

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B
S
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   330.........340.........350.........360.........370.... .....380........
 
   427..430.........440.........450.........460.........470.........480.........490.........500......
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Query Sequence  GQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPAR
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Template Sequence  GPITVGKVYEVLPFGNTLVVMDLKGKEILAALENGVSQWENTAGR. . . . . . . . . . . . . . . . . FLQVSGLRYAFDLSRPA.
Template Known Secondary structure  S
S

TTGGGT
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STTS
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   389390.........400.........410.........420.........430... ......440.........450
 
   507..510.........520...... ...530.........540......... 550........ .560.........570.........580
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Query Sequence  YDGECQMINANAERIKNLTF. . . . NGKPIDPNAMFLVATNNYRAYGG. KFAGTGDSH. IAFASPDENRSVLAAWIADESK
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Template Sequence  . . . . . . . . . . . GSRVVRVEVKTEKGYVPLDLEATYRVVVNNFIANGGDGFTVLKEAQGYRVDTGFSDAESFMDYLKEL. .
Template Known Secondary structure  ...........TS
TT

TTSTTGGG
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   451........460.........470.........480.........490.........500.........510.......
 
   581........590.........
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Query Sequence  RAGEIHPAADNNWRLAPIA
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Template Sequence  . . KVVEAGLEGRIEVLNEP
Template Known Secondary structure  ..S




S
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   518.520.........530....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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