Job Description P08331 Confidence 29.36% Date Wed Jan 25 15:20:13 GMT 2012 Rank 122 Aligned Residues 63 % Identity 13% Template c4a1cD_ PDB info PDB header:ribosome Chain: D: PDB Molecule:60s ribosomal protein l11; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 4. Resolution 3.52 Å

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		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.							.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.				.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																												.	.	.
Query SS confidence																							.	.	.	.	.	.																												.	.	.
Query Sequence		I	V	V	K	A	S	G	K	E	V	K	E	W	L	E	C	S	A	G	Q	F	.	.	.	.	.	.	N	Q	I	D	P	N	S	T	K	P	Q	S	L	I	N	W	D	G	F	R	T	Y	N	F	D	V	I	.	.	.	D	G	V	N	Y	Q	I	D	V	T	Q	P	A	R	Y	D	G	E	C	Q	M	I	N
Query Conservation																							.	.	.	.	.	.																												.	.	.
Alig confidence																							.	.	.	.	.	.																					.							.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	H	V	T	I	R	G	D	K	A	R	D	I	L	T	R	G	L	K	V	K	E	M	E	L	R	K	K	N	F	S	N	T	G	N	F	G	F	G	I	Q	E	H	I	D	L	G	.	M	K	Y	D	P	S	T	G	I	F	G	M	D	F	Y	V	V	L	E	R	P	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																						T	T	T				G	G	G	B		T	T	S									G	G	G	G	T	.					G	G	G														G	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		516	.	.	.	520	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	A	E	R	I
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	G	T	R	V
Template Known Secondary structure		.	.	G	G
Template Predicted Secondary structure		.	.
Template SS confidence
				135	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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