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Job DescriptionP08331
Confidence99.12%DateWed Jan 25 15:20:13 GMT 2012
Rank25Aligned Residues219
% Identity19%Templatec3t1iC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:double-strand break repair protein mre11a; PDBTitle: crystal structure of human mre11: understanding tumorigenic mutations
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30... ......40.........50.........60.........70.........80.........90.........100.
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Query Sequence  DLRIMETTDLH. SNMMDFDYYKDTATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVY
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Template Sequence  TFKILVATDIHLGFXEK. . . . . DAVRGNDTFVTLDEILRLAQENEVDFILL. GGDLFHENKPSRKTLHT. . . . . . . . . CL
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BTTTSS.....
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   12.......20........ .30.........40.........50....... ..60.........70.... ..
 
   102..... ..110.........120.........130.........140.........150.........160
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Query Sequence  KALNTL. . . . . . . . . . . . . . . . . . . . . DYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDT
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Template Sequence  ELLRKYCXGDRPVQFEILSDQSNLNISIPVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSXSVEKIDISPVLLQ. .
Template Known Secondary structure  BSSS




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   77..80.........90.........100.........110.........120.........130.........140.........150....
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  EVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGADVVVVLAHSGLSADPYKVMAENS
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Template Sequence  . . . . . . . . KGSTKIALYGLGSIPDERLYRXFVNKKVTXLRP. . . . . . . . . . KEDENSWFNLFVIHQNRSKHGSTNFIPEQ
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   171........180.........190.........200... ......210.........220.........230..
 
   241........250.........260.........270.........280.........290
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Query Sequence  VYYLSEIPGVNAIMFGHAHAVFPGKDFADIEGADIAKGTLNGVPAVMPGM
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Template Sequence  FLD. . . . DFIDLVIWGHEHECK. . . . . . . . . . IAPTKNEQQLFYISQPGS
Template Known Secondary structure  GS
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   233.. ....240.........250 .........260........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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