Job Description P08331 Confidence 87.27% Date Wed Jan 25 15:20:13 GMT 2012 Rank 59 Aligned Residues 159 % Identity 16% Template c3d6nB_ PDB info PDB header:hydrolase/transferase Chain: B: PDB Molecule:aspartate carbamoyltransferase; PDBTitle: crystal structure of aquifex dihydroorotase activated by aspartate2 transcarbamoylase Resolution 2.30 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	I	N	D	A	R	N	E	V	K	N	S	V	L	V	D	N	G	D	L	I	Q	G	S	P	L	A	D	Y	M	S	A	K	G	L	K	A	G	D	I	H	P	V	Y	K	A	L	N	T	L	D	Y	T	V	G	T	L	G	N	H	E	F	N	Y	G	L	D	Y	L	K	N	A	L	A	G	A	K	F	P
Query Conservation
Alig confidence																						.	.	.	.	.	.	.												.	.	.	.	.																		.	.	.
Template Conservation																						.	.	.	.	.	.	.												.	.	.	.	.																		.	.	.
Template Sequence		S	F	E	K	A	A	R	E	L	G	I	E	T	Y	L	V	S	G	S	E	.	.	.	.	.	.	.	S	S	T	V	K	G	E	S	F	F	D	.	.	.	.	.	T	L	K	T	F	E	G	L	G	F	D	Y	V	V	F	R	V	.	.	.	P	F	V	F	F	P	Y	K	E	I	V	K	S	L	N	L	R
Template Known Secondary structure										T	T								T	T	T	.	.	.	.	.	.	.	T	S			T	T						.	.	.	.	.								T	T		S							.	.	.	S	S				S							T		S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.												.	.	.	.	.																		.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70								.	.	.	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		137	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		Y	V	N	A	N	V	.	I	D	A	R	T	K	Q	P	M	F	T	P	Y	L	I	K	D	T	E	V	V	D	K	D	G	K	K	Q	T	L	K	I	G	Y	I	G	V	V	P	P	Q	I	M	G	W	D	K	A	N	L	S	G	K	V	T	V	N	D	I	T	E	T	V	R	K	Y	V	P	E	M	R	E	K
Query Conservation								.
Alig confidence								.																			.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	N	A	G	D	G	T	H	Q	H	P	S	Q	G	L	I	D	F	F	T	I	K	E	H	.	.	.	.	.	F	G	E	V	K	D	L	R	V	L	Y	V	G	D	I	K	H	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	R	S	G	A	P	L	L	N	M	F
Template Known Secondary structure								T	T	T	B																.	.	.	.	.		S			T	T							S			T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T
Template Predicted Secondary structure																											.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																				160	.	.	.	.	.	.	.	.	.	170	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	V	V	V	V	L	A	H	S	G	L	S	A	D	P	Y	K	V	M	A	E	N	S	V	Y	Y	L	S	E	I	P	G	V	N	A	I	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	K	I	G	V	C	G	P	K	T	L	I	P	R	D	V	E	V	F	K	V	D	V	F	D	D	V	D	K	G	I	D	W	A	D	V	V	I
Template Known Secondary structure		T							S		G	G	G	S		T	T	G	G	G	G						S	S									S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions