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Job DescriptionP08331
Confidence100.00%DateWed Jan 25 15:20:13 GMT 2012
Rank1Aligned Residues480
% Identity21%Templatec2wdfA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sulfur oxidation protein soxb; PDBTitle: termus thermophilus sulfate thiohydrolase soxb
Resolution2.08 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40......... 50.
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Query Sequence  AATVDLRIMETTDLHSNMMDFDYYKDTATEK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FG
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Template Sequence  PPYGDATLLYFSDLHGQAFPHYFMEPPNLIAPKPLMGRPGYLTGEAILRYYGVERGTPLAYLLSYVDFVELARTFGPIGG
Template Known Secondary structure 


SS


TT

S
BB



S




GGGTTSTTS

T

TTS
STT

B

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   35....40.........50.........60.........70.........80.........90.........100.........110....
 
   52.......60....... ..70.........80.........90.........100.........110.........120.......
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Query Sequence  LVRTASLINDARNEVK. . . . NSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVYKALNTLDYTVGTLGNHEFNYGLDYLK
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Template Sequence  MGALTALIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEA. . . . . . . . VVRWQNLVGVDHMV. SHWEWTLGRERVE
Template Known Secondary structure  TT

S

SSSSTTT........T


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SGGGGG
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   115....120.........130.........140.........150........ .160.........170.. .......180.....
 
   128.130.........140.........150.........160.........170.........180.........190.........200.......
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Query Sequence  NALAGAKFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRK
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Template Sequence  ELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRV. . . . . . . . . GPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQE
Template Known Secondary structure 

S

SS
TTT

BSS
S.........TT

TTS
GGGSTT



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   186...190.........200.........210........ .220.........230.........240.........250......
 
   208.210.........220.........230.........240.........250.........260.........270.........280.......
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Query Sequence  YVPEMREKGADVVVVLAHSGLSADPYKVMAENSVYYLSEIPGVNAIMFGHAHAVFPGKDFADIEGADIAKGTLNGVPAVM
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Template Sequence  AVDKARAEGANAVVLLSHNGMQLDA. . . . . . . . . ALAERIRGIDLILSGHTHDLTPRPW. . . . . . . . . . . . RVGKTWIVA
Template Known Secondary structure  TT
S
S
.........TTSSS


SS



SS
............TT
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   257..260.........270.........280. ........290.........300...... ...310.....
 
   288.290.........300.........310.........320.........330.........340.........350.........360.......
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Query Sequence  PGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGKSADNMYSYL
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Template Sequence  GSAAGKALMRVDLKLWKGG. . . . IANLRVRVLPV. . . . . LAEHLPKAEDVEAFLKAQLAPHQDHLFTPLAVSETLLYKRD
Template Known Secondary structure 

STT
TT....
.....BGGGS


GGGSSS
B



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   316...320.........330.... .....340..... ....350.........360.........370.........380......
 
   368.370.........380.........390.........400.........410.........420. ........430.........440.. .
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Query Sequence  ALVQDDPTVQVVNNAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRKNDPASY. . . VEVEKGQLTFRNAADLYLYPN. T
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Template Sequence  T. . LYSTWDQLVGEAVKAIYPEV. . . . . . . . . . . . . . . . . . . . . . EVVFSPAVRWGTTILPGQAITWDHLYAYTGFTYPE
Template Known Secondary structure  S..S


TT
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S


BB
TT

SS
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   387 ..390.........400....... ..410.........420.........430.........440..
 
   444.....450.........460.........470.........480.........490.........500.........510.........520...
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Query Sequence  LIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKN
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Template Sequence  LYLFYLRGAQIKAVLEDIASNVFTSDPF. . . . . . . . . . . YQQGGDVSRVFGLRYVLDPDAPT. . . . . . . . . . . . GERVRE
Template Known Secondary structure  T
S
TT...........T






T
TTS
T............TSS
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   443......450.........460.........470 .........480.........490... ......
 
   524.....530.........540.........550.........560.........570.........580.........590.........600...
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Query Sequence  LTFNGKPIDPNAMFLVATNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWIADESKRAGEIHPAADNNWRLAPIAGDKK
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Template Sequence  VEVGGRPLDPNRRYLAAAYGGRLQR. . . . . . VGEAKPGYEPRPIYEVLAEYLRSV. . . . GRVRVRPEPNVKVIGRNYRLP
Template Known Secondary structure  TT

TTSSSSGGG......GS
TT


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   500.........510.........520.... .....530.........540........ .550.........560.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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