Job Description P08331 Confidence 97.99% Date Wed Jan 25 15:20:13 GMT 2012 Rank 47 Aligned Residues 153 % Identity 23% Template c2kknA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of themotoga maritima protein tm1076:2 northeast structural genomics consortium target vt57 Resolution UNK

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	M	E	T	T	D	L	H	S	N	M	M	D	F	D	Y	Y	K	D	T	A	T	E	K	F	G	L	V	R	T	A	S	L	I	N	D	A	R	N	E	V	K	N	S	V	L	V	D	N	G	D	L	I	Q	G	S	P	L	A	D	Y	M	S	A	K	G	L	K	A	G	D	I	H	P	V	Y	K	A	L
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	F	L	L	I	S	D	S	H	V	P	V	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	L	P	D	E	I	L	N	S	L	K	E	Y	D	G	V	I	G	L	G	D	Y	V	D	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	I	L	L
Template Known Secondary structure											B	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										G	G	G	G		S					S	S		B	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.																	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																			.	.	.	.	.
		105	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		N	T	L	D	.	Y	T	V	G	T	L	G	N	H	E	F	N	Y	G	L	D	Y	L	K	N	A	L	A	G	A	K	F	P	Y	V	N	A	N	V	I	D	A	R	T	K	Q	P	M	F	T	P	Y	L	I	K	D	T	E	V	V	D	K	D	G	K	K	Q	T	L	K	I	G	Y	I	G	V	V	P	P	Q
Query Conservation						.
Alig confidence						.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Template Sequence		E	K	F	S	K	E	F	Y	G	V	H	G	N	M	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	V	K	E	H	L	P	F	S	K	V	L	L	V	.	.	.	.	.	.	.	.	.	E	G	V	T	I	G	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	S	S							S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	G	T	S		S							.	.	.	.	.	.	.	.	.	T	T					.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																											.	.	.	.	.	70	.	.	.	.	.	.	.	.	.										80	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	G	W	D	K	A	N	L	S	G	K	V	T	V	N	D	I	T	E	T	V	R	K	Y	V	P	E	M	R	E	K	G	A	D	V	V	V	V	L	A	H	S	G	L	S	A	D	P	Y	K	V	M	A	E	N	S	V	Y	Y	L	S	E	I	P	G	V	N	A	I	M	F	G	H	A	H	A	V	F	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	C	H	G	.	.	.	.	.	W	G	A	P	W	D	L	K	D	R	L	L	K	V	F	N	E	K	P	Q	V	I	L	F	G	H	T	H	E	P	E	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	.	.	.	.	.															S	S	S			S						S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.
Template SS confidence
																																									86	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	D	F	A	D	I	E	G	A	D	I	A	K	G	T	L	N	G	V	P	A	V	M	P	G	M	W	G	D	H	L	G	V	V	D	L	Q	L	S	N	D	S	G	K	W	Q	V	T	Q
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	A	G	V	R	F	L	N	P	G	S	L	A	E	G	.	S	Y	A	V	L	E	L	D	G	G	E	V	R	F	E	L	K	T
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T									T	T	T	T	.									T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		122															.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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