Job Description P08331 Confidence 70.39% Date Wed Jan 25 15:20:13 GMT 2012 Rank 80 Aligned Residues 172 % Identity 15% Template c1zq2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:ornithine carbamoyltransferase; PDBTitle: crystal structure of n-acetyl-l-ornithine transcarbamylase2 complexed with cp Resolution 1.95 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.																																												.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.																																												.	.	.	.	.	.
Query Sequence		S	L	I	N	D	A	R	N	E	V	K	N	S	V	L	V	D	N	G	D	.	.	.	.	.	L	I	Q	G	S	P	L	A	D	Y	M	S	A	K	G	L	K	A	G	D	I	H	P	V	Y	K	A	L	N	T	L	D	Y	T	V	G	T	L	G	N	H	E	F	.	.	.	.	.	.	N	Y	G	L	D	Y
Query Conservation																						.	.	.	.	.																																												.	.	.	.	.	.
Alig confidence																						.	.	.	.	.																			.	.	.	.	.									.												.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.									.
Template Sequence		S	F	E	L	G	A	F	Q	L	G	G	H	A	V	V	L	Q	P	G	K	D	A	W	P	I	E	F	N	L	G	T	V	M	D	G	D	T	E	E	H	I	A	E	.	.	.	.	.	V	A	R	V	L	G	R	Y	.	V	D	L	I	G	V	R	A	F	P	K	F	V	D	W	S	K	D	R	E	D	Q	V
Template Known Secondary structure										T	T								B	T	T	T	B						S	S	S					S	S								.	.	.	.	.									.		S										S	S						T	T
Template Predicted Secondary structure																																													.	.	.	.	.									.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		L	K	N	A	L	A	G	A	K	F	P	Y	V	N	A	N	V	I	D	A	R	T	K	Q	P	M	F	T	P	Y	L	I	K	D	T	E	V	V	D	K	D	G	.	.	K	K	Q	T	L	K	I	G	Y	I	G	V	V	P	P	Q	I	M	G	W	D	K	A	N	L	S	G	K	V	T	V	N	D	I	T	E
Query Conservation																																												.	.
Alig confidence																	.																				.	.	.	.	.			.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																				.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	S	F	A	K	Y	S	P	V	P	V	I	N	M	.	E	T	I	T	H	P	C	Q	E	L	A	H	A	L	A	L	Q	E	H	.	.	.	.	.	F	G	T	P	D	L	R	G	K	K	Y	V	L	T	W	T	Y	H	P	K	P	L	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A
Template Known Secondary structure										S	S					S	.	S	S	S																	.	.	.	.	.		T	S	S			T	T											S	S				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.																				.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.																.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.													.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	R	K	Y	V	P	E	M	R	E	K	G	A	D	V	V	V	V	L	A	H	S	G	L	S	A	D	P	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	V	M	A	E	N	S	V	Y	Y	L	S	E	I	P	G	V	N	A	I	M	F
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	N	S	A	L	T	I	A	T	R	M	G	M	D	V	T	L	L	C	P	T	P	D	Y	I	L	D	E	R	Y	M	D	W	A	A	Q	N	V	A	E	S	G	G	S	L	Q	V	S	H	D	I	D	S	A	Y	A	G	A	D	V	V	Y	A
Template Known Secondary structure													T	T								S	S	G	G	G																		S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions