Job Description P08331 Confidence 62.96% Date Wed Jan 25 15:20:13 GMT 2012 Rank 87 Aligned Residues 176 % Identity 11% Template c1js1Z_ PDB info PDB header:transferase Chain: Z: PDB Molecule:transcarbamylase; PDBTitle: crystal structure of a new transcarbamylase from the2 anaerobic bacterium bacteroides fragilis at 2.0 a3 resolution Resolution 2.00 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																																												.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.
Query Sequence		S	L	I	N	D	A	R	N	E	V	K	N	S	V	L	V	D	N	G	D	L	I	Q	G	S	P	L	A	D	Y	M	S	A	K	G	L	K	A	G	D	I	H	P	V	Y	K	A	L	N	T	L	D	Y	T	V	G	T	L	.	.	.	.	.	.	G	N	H	E	F	N	Y	G	L	D	Y	L	K	N	A	L
Query Conservation																																																												.	.	.	.	.	.
Alig confidence																																																					.							.	.	.	.	.	.
Template Conservation																																																					.
Template Sequence		S	T	Q	K	A	A	L	N	L	G	M	N	V	I	V	L	D	I	N	Q	G	A	W	K	L	E	T	E	R	G	V	I	M	D	G	D	K	P	E	H	L	L	E	A	I	P	V	M	G	C	Y	.	C	D	I	I	G	V	R	S	F	A	R	F	E	N	R	E	Y	D	Y	N	E	V	I	I	N	Q	F	I
Template Known Secondary structure										T	T										T	T	S						S	S	S					S	S														T	T	.		S										S	S							T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		A	G	A	K	F	P	Y	V	N	A	N	V	I	D	A	R	T	K	Q	P	M	F	T	P	Y	L	I	K	D	T	E	V	V	D	K	D	G	K	K	Q	.	T	L	K	I	G	Y	I	G	V	V	P	P	Q	I	M	G	W	D	K	A	N	L	S	G	K	V	T	V	N	D	I	T	E	T	V	R	K	Y	V
Query Conservation																																										.
Alig confidence																																.	.	.	.	.						.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	H	S	G	R	P	V	F	S	M	E	A	A	T	R	H	P	L	Q	S	F	A	D	L	I	T	I	E	E	Y	.	.	.	.	.	K	K	T	A	R	P	K	V	V	M	T	W	A	P	H	P	R	P	L	P	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	N	S	F	A
Template Known Secondary structure				S	S	S					S	S		S	S																	.	.	.	.	.		S	S	S	S											S	S				S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																		.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	M	R	E	K	G	A	D	V	V	V	V	L	A	H	S	G	L	S	A	D	P	Y	K	V	M	A	E	N	S	V	Y	Y	L	S	E	I	P	G	V	N	A	I	M	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	W	M	N	A	T	D	Y	E	F	V	I	T	H	P	E	G	Y	E	L	D	P	K	F	V	G	N	A	R	V	E	Y	D	Q	M	K	A	F	E	G	A	D	F	I	Y	A
Template Known Secondary structure						T	S	S	S								T	T									T	T					S							T	T		S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions