Return to main results Retrieve Phyre Job Id

Job DescriptionP76158
Confidence1.59%DateThu Jan 5 12:19:50 GMT 2012
Rank75Aligned Residues7
% Identity29%Templatec1cl4A_
PDB info PDB header:viral proteinChain: A: PDB Molecule:protein (gag polyprotein); PDBTitle: nucleocapsid protein from mason-pfizer monkey virus (mpmv)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20...
Predicted Secondary structure 

Query SS confidence 






Query Sequence  VGNVWSD
Query Conservation   
    
Alig confidence 






Template Conservation 

 


 
Template Sequence  RGKHWAN
Template Known Secondary structure  S
SS
ST
Template Predicted Secondary structure 


Template SS confidence 






   58.60....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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