 |
Job Description | P10443 | Confidence | 44.24% | Date | Thu Jan 5 11:32:19 GMT 2012 |
Rank | 145 | Aligned Residues | 46 |
% Identity | 30% | Template | d2i1qa1 |
SCOP info | SAM domain-like
| Rad51 N-terminal domain-like
| DNA repair protein Rad51, N-terminal domain
|
Resolution | 1.90 |
|
  |   |
835 | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
870 | . | . | . | . | . | . | . | . | . | 880 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | A | I | K | G | V | G | E | G | P | I | E | A | I | I | E | A | R | N | K | G | G | Y | F | R | E | L | F | D | L | C | A | R | T | . |
. |
. |
. |
. |
D | T | K | K | L | N | R | R | V | L | E | K | L | I | M | S |
Query Conservation |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|
|
|   |
|   |   |
|
|   |   |
|   | . | . | . | . | . |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |
| . | . | . | . | . |   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |
Template Sequence |   |
L | T | D | L | P | G | V | G | P | S | T | A | E | K | L | V | E | A | G | . |
. |
. |
. |
. |
Y | I | D | F | M | K | I | A | T | A | T | V | G | E | L | T | D | I | E | G | I | S | E | K | A | A | A | K | M | I | M | G |
Template Known Secondary structure |   |
| T | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . |
|
| S |  |  |  |  |  | T |
|
|  |  |  |  |  | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|