Job Description P10443 Confidence 95.58% Date Thu Jan 5 11:32:19 GMT 2012 Rank 61 Aligned Residues 78 % Identity 14% Template c3pgzB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:single-stranded dna-binding protein; PDBTitle: crystal structure of a single strand binding protein (ssb) from2 bartonella henselae Resolution 2.10 Å

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		993	.	.	.	.	.	.	1000	.	.		.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.															1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.		.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.
Predicted Secondary structure												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		V	I	T	A	A	G	L	V	V	A	.	A	R	V	M	V	T	K	R	G	N	R	I	G	I	C	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	R	S	G	R	L	E	V	M	L	F	T	D	A	.	L	D	K	Y	Q	Q	L	L	E	K	D	R	I	L	I	V	S	G	Q	V	S	F
Query Conservation												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		K	V	I	L	I	G	N	L	G	A	D	P	E	I	R	R	L	N	S	G	D	Q	V	A	N	L	R	I	A	T	S	E	S	W	R	D	R	N	T	N	E	R	K	E	R	T	E	W	H	N	I	V	I	F	N	E	N	L	V	K	V	V	E	Q	Y	L	K	K	G	S	K	I	Y	I	E	G	Q	L	Q	T
Template Known Secondary structure										S	S								T	T	S																	T	T	T																													T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		1057	.	.	1060	.	.								.	.	.	.	.	.	.	1070
Predicted Secondary structure								.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.
Query Sequence		D	D	F	S	G	G	.	.	.	.	.	.	.	L	K	M	T	A	R	E	V
Query Conservation								.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	W	Q	D	Q	N	G	N	D	R	Y	T	T	E	I	V	L	Q	K	Y
Template Known Secondary structure							T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions