Return to main results Retrieve Phyre Job Id

Job DescriptionP10443
Confidence26.40%DateThu Jan 5 11:32:19 GMT 2012
Rank239Aligned Residues10
% Identity50%Templatec3mlrP_
PDB info PDB header:immune systemChain: P: PDB Molecule:hiv-1 gp120 third variable region (v3) crown; PDBTitle: crystal structure of anti-hiv-1 v3 fab 2557 in complex with a ny5 v32 peptide
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   353......360..
Predicted Secondary structure 





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Query Sequence  DNGVPVGPGR
Query Conservation    

 




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Template Sequence  KKGIAIGPGR
Template Predicted Secondary structure 






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   304.....310...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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