Job Description P10443 Confidence 23.03% Date Thu Jan 5 11:32:19 GMT 2012 Rank 269 Aligned Residues 109 % Identity 21% Template c3l6aA_ PDB info PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor 4 gamma 2; PDBTitle: crystal structure of the c-terminal region of human p97 Resolution 2.00 Å

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		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		S	T	E	D	Y	L	V	K	R	A	K	E	G	L	E	E	R	L	A	F	L	F	P	D	E	E	E	R	L	K	R	R	P	E	Y	D	E	R	L	E	T	E	L	Q	V	I	N	Q	M	G	F	P	G	Y	F	L	.	.	I	V	M	E	F	I	Q	W	S	K	D	N	G	V	P	V	G	P	G	R	G	S
Query Conservation																																																										.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.													.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Sequence		H	S	K	E	E	L	L	K	L	T	E	T	V	V	T	E	Y	L	N	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	N	E	A	V	N	G	V	R	E	M	R	A	P	K	H	F	L	P	E	M	L	S	K	V	I	I	L	S	L	D	R	.	.	.	.	S	D	E	D	K	E
Template Known Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T			G	G	G														T	S	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.																	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	G	S	L	V	A	Y	A	L	K	I	T	D	L	D	P	L	E	F	D	L	L	F	E	R	F	L	N	P	E	R	V	S	M	P	D	F	D	V	D	F	C	M	E	K	R	D	Q	V	I	E	H	V	A	D	M	Y	G	R
Query Conservation
Alig confidence																														.	.	.	.													.	.	.	.	.
Template Conservation																														.	.	.	.													.	.	.	.	.
Template Sequence		K	A	S	S	L	I	S	L	L	K	Q	E	G	I	A	T	S	D	N	F	M	Q	A	F	L	N	V	L	.	.	.	.	D	Q	C	P	K	L	E	V	D	I	P	L	.	.	.	.	.	V	K	S	Y	L	A	Q	F	A	A	R
Template Known Secondary structure													T	T	S	S														.	.	.	.		T									T	T	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.													.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions