Job Description P10443 Confidence 94.99% Date Thu Jan 5 11:32:19 GMT 2012 Rank 69 Aligned Residues 79 % Identity 14% Template c3kojA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:uncharacterized protein ycf41; PDBTitle: crystal structure of the ssb domain of q5n255_synp6 protein2 from synechococcus sp. northeast structural genomics3 consortium target snr59a. Resolution 1.90 Å

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		991	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.		.	.	.	.	.	.	.	.			1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.
Predicted Secondary structure																							.									.	.
Query SS confidence																							.									.	.
Query Sequence		G	K	V	I	T	A	A	G	L	V	V	A	A	R	V	M	V	T	K	R	G	.	N	R	I	G	I	C	T	L	.	.	D	D	R	S	G	R	L	E	V	M	L	F	T	D	A	L	D	K	Y	Q	Q	L	L	E	K	D	R	I	L	I	V	S	G	Q	V	S	F	D	D	F	S	G	G	L	K	M	T	A
Query Conservation																							.									.	.
Alig confidence																							.									.	.																																								.
Template Conservation																																																																									.
Template Sequence		N	S	C	I	L	Q	A	T	V	V	E	A	P	Q	L	R	Y	A	Q	D	N	Q	T	P	V	A	E	X	V	V	Q	F	P	G	A	P	A	R	L	K	V	V	G	W	G	A	V	A	Q	E	L	Q	D	R	C	R	L	N	D	E	V	V	L	E	G	R	L	R	I	N	S	.	E	K	Q	T	E	L	T	V
Template Known Secondary structure																				T	T	S	S	S																						T												T	T														.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80
		1068	.	1070
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		94	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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