Job Description P10443 Confidence 92.36% Date Thu Jan 5 11:32:19 GMT 2012 Rank 82 Aligned Residues 80 % Identity 15% Template c3k8aA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative primosomal replication protein; PDBTitle: neisseria gonorrhoeae prib Resolution 2.70 Å

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		990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020						.	.	.	.								.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.					.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.					.	.	.	.	.	.	.
Query Sequence		R	G	K	V	I	T	A	A	G	L	V	V	A	A	R	V	M	V	T	K	R	G	N	R	I	G	I	C	T	L	D	.	.	.	.	.	D	R	S	G	.	.	.	.	.	.	.	R	L	E	V	M	L	F	T	D	A	L	D	K	Y	Q	Q	L	L	E	K	D	R	I	L	I	V	S	G	Q	V	S	F	D
Query Conservation																																	.	.	.	.	.					.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.					.	.	.	.	.	.	.																.	.
Template Conservation																																																																.	.
Template Sequence		T	N	L	V	S	L	A	A	L	I	E	K	A	F	P	I	R	Y	T	P	A	G	I	P	V	L	D	I	I	L	K	H	E	S	W	Q	E	E	N	G	Q	Q	C	L	V	Q	L	E	I	P	A	R	I	L	G	R	Q	A	E	E	W	Q	.	.	Y	R	Q	G	D	C	A	T	V	E	G	F	L	A	Q	K
Template Known Secondary structure																					T	T	S																	T	T																					S	T	.	.	T		T	T												S
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		1058	.	1060	.	.		.	.	.	.	.	.	.	1070	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		D	F	S	G	G	.	L	K	M	T	A	R	E	V	M
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		S	R	R	S	L	M	P	M	L	R	I	Q	N	I	K
Template Known Secondary structure		S	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions