Job Description P10443 Confidence 97.46% Date Thu Jan 5 11:32:19 GMT 2012 Rank 31 Aligned Residues 86 % Identity 22% Template c3dm3A_ PDB info PDB header:replication Chain: A: PDB Molecule:replication factor a; PDBTitle: crystal structure of a domain of a replication factor a2 protein, from methanocaldococcus jannaschii. northeast3 structural genomics target mjr118e Resolution 2.40 Å

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		985	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.				.	.	.	.	.	.	1010	.	.	.	.	.	.			.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.														.	.
Query SS confidence																					.	.	.														.	.
Query Sequence		M	H	P	T	E	R	G	K	V	I	T	A	A	G	L	V	V	A	A	.	.	.	R	V	M	V	T	K	R	G	N	R	I	G	I	.	.	C	T	L	D	D	R	S	G	R	L	E	V	M	L	F	T	D	A	L	D	K	Y	Q	Q	L	L	E	K	D	R	I	L	I	V	S	G	Q	V	S	F	D	D	F
Query Conservation																					.	.	.														.	.
Alig confidence																					.	.	.														.	.																						.	.	.																		.
Template Conservation																																																												.	.	.																		.
Template Sequence		I	G	E	L	S	P	G	M	T	A	T	F	E	G	E	V	I	S	A	L	P	I	K	E	F	K	R	A	D	G	S	I	G	K	L	K	S	F	I	V	R	D	E	T	G	S	I	R	V	T	L	W	D	N	L	T	D	I	.	.	.	D	V	G	R	G	D	Y	V	R	V	R	G	Y	I	R	E	G	.	Y
Template Known Secondary structure		G	G	G			S	S																					T	T	S													T	T									G	G	G	G	G	S	.	.	.				T	T													.	T
Template Predicted Secondary structure																																																												.	.	.																		.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.
		1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	G	L	K	M	T	A	R	E	V	M	D	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	G	L	E	C	T	A	N	Y	V	E	I	L	K
Template Known Secondary structure		T	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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