Job Description P10443 Confidence 89.31% Date Thu Jan 5 11:32:19 GMT 2012 Rank 86 Aligned Residues 142 % Identity 8% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		V	H	L	R	V	H	S	D	Y	S	M	I	D	G	L	A	K	T	A	P	L	V	K	K	A	A	A	L	G	M	P	A	L	A	I	T	D	F	T	N	L	C	G	L	V	K	F	Y	G	A	G	H	G	A	G	I	K	P	I	V	G	A	D	F	N	V	Q	C	D	L	L	G	D	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																	.																							.																						.	.	.	.										.	.	.	.	.	.	.
Template Conservation																	.																							.																						.	.	.	.
Template Sequence		I	P	F	L	L	M	T	Y	Y	N	P	I	F	R	I	.	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	P	D	L	.	P	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V	L	S	F	V	P	.	.	.	.	L	G	A	P	T	S	T	R	K	R	I	K	L	I	C	E
Template Known Secondary structure		S															.												T	T							T	T		.															T	T						.	.	.	.				T	T
Template Predicted Secondary structure																	.																							.																						.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.																													.	.	.	.
Query SS confidence		.	.																													.	.	.	.
Query Sequence		.	.	E	L	T	H	L	T	V	L	A	A	N	N	T	G	Y	Q	N	L	T	L	L	I	S	K	A	Y	Q	R	.	.	.	.	G	Y	G	A	A	G	P	I	I	D	R	D	W	L	I	E	L	N	E	G	L	I	L	L	S	G	G	R	M	G	D	V	G	R	S	L	L	R	G	N	S	A	L	V	D	E
Query Conservation		.	.																													.	.	.	.
Alig confidence		.	.																													.	.	.	.									.																		.	.	.	.	.
Template Conservation																																												.																		.	.	.	.	.
Template Sequence		A	A	D	E	M	T	Y	F	V	S	V	T	G	Y	E	R	I	K	K	K	V	E	E	Y	R	E	L	C	D	K	P	V	V	V	G	F	G	V	S	K	K	E	.	H	A	R	E	I	G	S	F	A	D	G	V	V	V	G	S	A	.	.	.	.	.	L	V	K	L	A	G	Q	K	K	I	E	D	L	G	N
Template Known Secondary structure				S	S						S	S																			S						S	S			S			.							T	T	S	S								.	.	.	.	.							T	T
Template Predicted Secondary structure																																												.																		.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.						.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		154	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	A	F	Y	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	K	E	L	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions